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基于设定转移函数的深度学习定量超声数据失配校准。

Calibrating Data Mismatches in Deep Learning-Based Quantitative Ultrasound Using Setting Transfer Functions.

出版信息

IEEE Trans Ultrason Ferroelectr Freq Control. 2023 Jun;70(6):510-520. doi: 10.1109/TUFFC.2023.3263119. Epub 2023 May 25.

Abstract

Deep learning (DL) can fail when there are data mismatches between training and testing data distributions. Due to its operator-dependent nature, acquisition-related data mismatches, caused by different scanner settings, can occur in ultrasound imaging. As a result, it is crucial to mitigate the effects of these mismatches to enable wider clinical adoption of DL-powered ultrasound imaging and tissue characterization. To address this challenge, we propose an inexpensive and generalizable method that involves collecting a large training set at a single setting and a small calibration set at each scanner setting. Then, the calibration set will be used to calibrate data mismatches by using a signals and systems perspective. We tested the proposed solution to classify two phantoms using an L9-4 array connected to a SonixOne scanner. To investigate generalizability of the proposed solution, we calibrated three types of data mismatches: pulse frequency mismatch, focus mismatch, and output power mismatch. Two well-known convolutional neural networks (CNNs), i.e., ResNet-50 and DenseNet-201, were trained using the ultrasound radio frequency (RF) data. To calibrate the setting mismatches, we calculated the setting transfer functions. The CNNs trained without calibration resulted in mean classification accuracies of around 52%, 84%, and 85% for pulse frequency, focus, and output power mismatches, respectively. By using the setting transfer functions, which allowed a matching of the training and testing domains, we obtained the mean accuracies of 96%, 96%, and 98%, respectively. Therefore, the incorporation of the setting transfer functions between scanner settings can provide an economical means of generalizing a DL model for specific classification tasks where scanner settings are not fixed by the operator.

摘要

深度学习 (DL) 在训练数据分布与测试数据分布存在差异时可能会失败。由于其依赖于运算符的性质,在超声成像中,可能会由于不同的扫描仪设置而导致与采集相关的数据不匹配。因此,减轻这些不匹配的影响对于更广泛地采用基于 DL 的超声成像和组织特征分析至关重要。为了解决这个挑战,我们提出了一种廉价且具有通用性的方法,该方法包括在单个设置下收集大量训练集,以及在每个扫描仪设置下收集小的校准集。然后,将使用信号和系统的观点来校准校准集,以校准数据不匹配。我们使用 L9-4 阵列连接到 SonixOne 扫描仪对两个体模进行分类来测试所提出的解决方案。为了研究所提出的解决方案的通用性,我们校准了三种类型的数据不匹配:脉冲频率不匹配、焦点不匹配和输出功率不匹配。使用超声射频 (RF) 数据训练了两种著名的卷积神经网络 (CNN),即 ResNet-50 和 DenseNet-201。为了校准设置不匹配,我们计算了设置传输函数。未经校准训练的 CNN 分别针对脉冲频率、焦点和输出功率不匹配的分类精度平均值约为 52%、84%和 85%。通过使用设置传输函数,可以匹配训练和测试域,我们分别获得了 96%、96%和 98%的平均精度。因此,在扫描仪设置不由操作员固定的特定分类任务中,在扫描仪设置之间采用设置传输函数可以提供一种经济的方法来推广 DL 模型。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/570e/10334367/4c9b7749e884/nihms-1904325-f0004.jpg

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