Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, College of Tropical Crops, Hainan University, Haikou 570228, China.
Key Laboratory for Quality Regulation of Tropical Horticultural Crops of Hainan Province, School of Horticulture, Hainan University, Haikou 570228, China.
Int J Mol Sci. 2023 Apr 17;24(8):7383. doi: 10.3390/ijms24087383.
is a commercially important medicinal plant widely cultivated in tropical regions. The natural resistance-associated macrophage protein (NRAMP) is widespread in plants and plays critical roles in transporting metal ions, plant growth, and development. However, the information on in is quite limited. In this study, we identified 12 genes in the areca genome, which were classified into five groups by phylogenetic analysis. Subcellular localization analysis reveals that, except for NRAMP2, NRAMP3, and NRAMP11, which are localized in chloroplasts, all other NRAMPs are localized on the plasma membrane. Genomic distribution analysis shows that 12 genes are unevenly spread on seven chromosomes. Sequence analysis shows that motif 1 and motif 6 are highly conserved motifs in 12 . Synteny analysis provided deep insight into the evolutionary characteristics of genes. Among the and the other three representative species, we identified a total of 19 syntenic gene pairs. Analysis of Ka/Ks values indicates that genes are subjected to purifying selection in the evolutionary process. Analysis of cis-acting elements reveals that genes promoter sequences contain light-responsive elements, defense- and stress-responsive elements, and plant growth/development-responsive elements. Expression profiling confirms distinct expression patterns of genes in different organs and responses to Zn/Fe deficiency stress in leaves and roots. Taken together, our results lay a foundation for further exploration of the regulatory function in areca response to Fe and Zn deficiency.
是一种商业上重要的药用植物,广泛种植在热带地区。天然抗性相关巨噬细胞蛋白 (NRAMP) 在植物中广泛存在,在运输金属离子、植物生长和发育中发挥着关键作用。然而,关于 在 中的信息相当有限。在这项研究中,我们在槟榔基因组中鉴定了 12 个基因,这些基因通过系统发生分析被分为五个组。亚细胞定位分析表明,除了定位于叶绿体的 NRAMP2、NRAMP3 和 NRAMP11 之外,所有其他的 NRAMPs 都定位于质膜上。基因组分布分析表明,12 个基因不均匀地分布在 7 条染色体上。序列分析表明, motif1 和 motif6 是 12 个 中的高度保守基序。同线性分析深入了解了 基因的进化特征。在 和其他三个代表物种中,我们总共鉴定出 19 对共线性基因对。Ka/Ks 值分析表明,在进化过程中 基因受到纯化选择。顺式作用元件分析表明, 基因启动子序列含有光响应元件、防御和应激响应元件以及植物生长/发育响应元件。表达谱分析证实了 基因在不同器官中的不同表达模式以及在叶片和根中对 Zn/Fe 缺乏胁迫的响应。综上所述,我们的研究结果为进一步探索 在槟榔对 Fe 和 Zn 缺乏的响应中的调控功能奠定了基础。