Suppr超能文献

新物种,从海洋海绵体物种中分离得到

sp. nov., isolated from marine sponge sp.

作者信息

Zhang Mimi, Song Qianqian, Sang Jin, Li Zhiyong

机构信息

State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, PR China.

出版信息

Int J Syst Evol Microbiol. 2023 May;73(5). doi: 10.1099/ijsem.0.005869.

Abstract

A novel bacterial strain, designated as WHS-Z9, was isolated from marine sponge sp. collected from Weihai (37° 25' N, 121° 58' E), Shandong Province, PR China. Cells of strain WHS-Z9 were Gram-stain-positive, non-spore-forming, non-motile, short-rod-shaped and light yellow-pigmented. The strain could grow at 10-40 °C (optimum, 20 °C), pH 4.5-9.5 (optimum, pH 8.5) and 2-14 % (w/v) NaCl (optimum, 4 %). The 16S rRNA gene sequence of strain WHS-Z9 showed 98.7  % similarity to that of NBRC 14811, 98.5  % to FXJ8.269 and 98.4 % to BBH7. The phylogenetic tree based on 16S rRNA gene sequences revealed that strain WHS-Z9 was clustered with o2. The whole genome of WHS-Z9 was approximately 4 217 721 bp in size with a G+C content of 65.2  %. The average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values among WHS-Z9 and other type strains were 83.3-85.5 % (ANI based on blast), 86.4-87.9  % (ANI based on MUMmer) and 41.9-57.5 % (dDDH). Percentage of conserved protein values between the genomes of strain WHS-Z9 and members of genera were 76.8-82.9 %, while the average amino acid identity (AAI) values were 83.7-87.0  %. The dDDH, ANI, AAI and POCP values were below the standard cut-off criteria for the delineation of bacterial species. The sole respiratory quinone in strain WHS-Z9 was MK-8(H), and the predominant fatty acids were anteiso-C and anteiso-C. The major polar lipids of WHS-Z9 consisted of diphosphatidylglycerol and glycolipid. The diagnostic cell-wall diamino acid of strain WHS-Z9 was -diaminopimelic acid. Based on the data obtained in this study, strain WHS-Z9 (=MCCC 1K07845=KCTC 49848) should be classified as the type strain of a novel species of the genus , for which the name sp. nov. is proposed.

摘要

从中国山东省威海市(北纬37°25′,东经121°58′)采集的海洋海绵中分离出一株新型细菌菌株,命名为WHS-Z9。WHS-Z9菌株的细胞革兰氏染色呈阳性,不形成芽孢,无运动性,呈短杆状,具有浅黄色色素。该菌株可在10-40℃(最适温度为20℃)、pH 4.5-9.5(最适pH为8.5)和2-14%(w/v)NaCl(最适浓度为4%)的条件下生长。WHS-Z9菌株的16S rRNA基因序列与日本模式培养物集存机构14811的序列相似度为98.7%,与FXJ8.269的相似度为98.5%,与BBH7的相似度为98.4%。基于16S rRNA基因序列构建的系统发育树显示,WHS-Z9菌株与o2聚类。WHS-Z9的全基因组大小约为4217721bp,G+C含量为65.2%。WHS-Z9与其他模式菌株之间的平均核苷酸同一性(ANI)和数字DNA-DNA杂交(dDDH)值分别为83.3-85.5%(基于blast的ANI)、86.4-87.9%(基于MUMmer的ANI)和41.9-57.5%(dDDH)。WHS-Z9菌株基因组与各属成员之间的保守蛋白百分比值为76.8-82.9%,而平均氨基酸同一性(AAI)值为83.7-87.0%。dDDH、ANI、AAI和POCP值均低于细菌物种划分的标准临界值。WHS-Z9菌株唯一的呼吸醌为MK-8(H),主要脂肪酸为anteiso-C和anteiso-C。WHS-Z9的主要极性脂类由双磷脂酰甘油和糖脂组成。WHS-Z9菌株诊断性细胞壁二氨基酸为-L-二氨基庚二酸。基于本研究获得的数据,WHS-Z9菌株(=MCCC 1K07845=KCTC 49848)应被归类为该属一个新物种的模式菌株,为此提议将其命名为sp. nov.。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验