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从患乳腺炎小鼠中分离出的多重耐药性大肠杆菌菌株的全基因组序列

Whole-Genome Sequence of Multidrug-Resistant Escherichia coli Strains Isolated from Mice with Mastitis.

作者信息

Hoque M Nazmul, Jerin Shobnom, Faisal Golam Mahbub, Das Ziban Chandra, Islam Tofazzal, Rahman Abu Nasar M Aminoor

机构信息

Molecular Biology and Bioinformatics Laboratory, Department of Gynaecology, Obstetrics, and Reproductive Health, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur, Bangladesh.

Institute of Biotechnology and Genetic Engineering, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur, Bangladesh.

出版信息

Microbiol Resour Announc. 2023 Jul 18;12(7):e0032023. doi: 10.1128/mra.00320-23. Epub 2023 Jun 14.

DOI:10.1128/mra.00320-23
PMID:37314348
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10353464/
Abstract

We sequenced the genomes of Escherichia coli isolates G2M6U and G6M1F, two multidrug-resistant strains that were isolated from mammary tissue and fecal samples, respectively, from mice with induced mastitis. The complete genomes of G2M6U and G6M1F consist of chromosomes of 4.4 Mbp and 4.6 Mbp, respectively.

摘要

我们对大肠杆菌分离株G2M6U和G6M1F的基因组进行了测序,这两个多药耐药菌株分别从诱导性乳腺炎小鼠的乳腺组织和粪便样本中分离得到。G2M6U和G6M1F的完整基因组分别由440万碱基对和460万碱基对的染色体组成。

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本文引用的文献

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Front Microbiol. 2022 Jul 7;13:928346. doi: 10.3389/fmicb.2022.928346. eCollection 2022.
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Induction of mastitis by cow-to-mouse fecal and milk microbiota transplantation causes microbiome dysbiosis and genomic functional perturbation in mice.通过牛至小鼠粪便和乳汁微生物群移植诱导乳腺炎会导致小鼠微生物群失调和基因组功能紊乱。
Anim Microbiome. 2022 Jul 6;4(1):43. doi: 10.1186/s42523-022-00193-w.
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Prevalence and risk factors for multidrug-resistant Escherichia coli isolated from subclinical mastitis in the western Chitwan region of Nepal.尼泊尔奇特旺西部地区亚临床乳腺炎中产 ESBLs 大肠杆菌的流行情况及其危险因素分析。
J Dairy Sci. 2021 Dec;104(12):12765-12772. doi: 10.3168/jds.2020-19480. Epub 2021 Apr 8.
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Genomic Epidemiology and Evolution of in Wild Animals in Mexico.在墨西哥野生动物中 的基因组流行病学和进化。
mSphere. 2021 Jan 6;6(1):e00738-20. doi: 10.1128/mSphere.00738-20.
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Nucleic Acids Res. 2021 Jan 8;49(D1):D644-D650. doi: 10.1093/nar/gkaa821.
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ResFinder 4.0 for predictions of phenotypes from genotypes.ResFinder 4.0 用于基因型到表型的预测。
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Insights Into the Resistome of Bovine Clinical Mastitis Microbiome, a Key Factor in Disease Complication.牛临床乳腺炎微生物组耐药组的见解,疾病并发症的关键因素。
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