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长链非编码 RNA MAGI2-AS3 编码的多肽抑制乳腺癌细胞的增殖和迁移。

LncRNA MAGI2-AS3-Encoded Polypeptide Restrains the Proliferation and Migration of Breast Cancer Cells.

机构信息

Department of Oncology, Affiliated Hospital of Hebei University of Engineering, Handan, 056000, Hebei, China.

Department of Breast Surgery, Affiliated Hospital of Hebei University of Engineering, Handan, 056000, Hebei, China.

出版信息

Mol Biotechnol. 2024 Jun;66(6):1409-1423. doi: 10.1007/s12033-023-00801-3. Epub 2023 Jun 26.

Abstract

Accumulating articles have reported the coding potential of long non-coding RNAs (lncRNAs). However, only a few lncRNAs-encoded peptides have been studied. Breast cancer (BRCA) progression-related gene modules were determined by weighted gene co-expression network analysis (WGCNA). Cell viability, proliferation, and migration capacities were assessed by Cell counting kit-8 (CCK8), 5-ethynyl-2'-deoxyuridine (EdU), and transwell assays. Immunofluorescence (IF) assay was implemented to observe protein expression. Co-immunoprecipitation (Co-IP) and high-performance liquid chromatography-tandem mass spectrometry (HPLC-MS/MS) were employed to analyze MAGI2 antisense RNA 3 (MAGI2-AS3)-ORF5-interacted proteins. WGCNA identified that MEpurple and MEblack modules were significantly negatively correlated with T stage in BRCA patients. MAGI2-AS3 was screened as one of the differentially expressed (DE) lncRNAs with translational potential in MEblack and MEpurple modules in BRCA. The data in The Cancer Genome Atlas (TCGA) uncovered that MAGI2-AS3 abundance was significantly decreased in invasive BRCA patients, and it had high diagnostic and prognostic values. MAGI2-AS3-ORF5 notably restrained BRCA cell viability, proliferation, and migration. Mechanically, MAGI2-AS3-ORF5 might affect the progression of BRCA cells by binding to extracellular matrix (ECM)-related proteins. MAGI2-AS3-ORF5 played an anti-tumor role by inhibiting BRCA cell viability, proliferation, and migration. MAGI2-AS3-ORF5 might modulate BRCA cell migration through ECM-associated proteins.

摘要

已有大量文章报道了长非编码 RNA(lncRNA)的编码潜力。然而,仅有少数 lncRNA 编码肽得到了研究。通过加权基因共表达网络分析(WGCNA)确定乳腺癌(BRCA)进展相关基因模块。通过细胞计数试剂盒-8(CCK8)、5-乙炔基-2'-脱氧尿苷(EdU)和 Transwell 测定评估细胞活力、增殖和迁移能力。免疫荧光(IF)测定用于观察蛋白表达。共免疫沉淀(Co-IP)和高效液相色谱-串联质谱(HPLC-MS/MS)用于分析 MAGI2 反义 RNA 3(MAGI2-AS3)-ORF5 相互作用蛋白。WGCNA 鉴定出 MEpurple 和 MEblack 模块与 BRCA 患者的 T 分期显著负相关。MAGI2-AS3 是 MEblack 和 MEpurple 模块中具有翻译潜力的差异表达(DE)lncRNA 之一。癌症基因组图谱(TCGA)的数据显示,MAGI2-AS3 在侵袭性 BRCA 患者中的丰度显著降低,具有较高的诊断和预后价值。MAGI2-AS3-ORF5 显著抑制 BRCA 细胞活力、增殖和迁移。从机制上讲,MAGI2-AS3-ORF5 通过与细胞外基质(ECM)相关蛋白结合,可能影响 BRCA 细胞的进展。MAGI2-AS3-ORF5 通过抑制 BRCA 细胞活力、增殖和迁移发挥抗肿瘤作用。MAGI2-AS3-ORF5 可能通过 ECM 相关蛋白调节 BRCA 细胞迁移。

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