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基于菲律宾植物源植物化学物质对四种糖尿病蛋白靶点(PTP1B、DPP-4、SGLT-2 和 FBPase)的抗糖尿病抑制剂的计算机筛选和鉴定。

In Silico Screening and Identification of Antidiabetic Inhibitors Sourced from Phytochemicals of Philippine Plants against Four Protein Targets of Diabetes (PTP1B, DPP-4, SGLT-2, and FBPase).

机构信息

Department of Chemical Engineering, University of the Philippines Diliman, Quezon City 1101, Metro Manila, Philippines.

出版信息

Molecules. 2023 Jul 9;28(14):5301. doi: 10.3390/molecules28145301.

Abstract

Current oral medications for type 2 diabetes target a single main physiological mechanism. They either activate or inhibit receptors to enhance insulin sensitivity, increase insulin secretion, inhibit glucose absorption, or inhibit glucose production. In advanced stages, combination therapy may be required because of the limited efficacy of single-target drugs; however, medications are becoming more costly, and there is also the risk of developing the combined side effects of each drug. Thus, identifying a multi-target drug may be the best strategy to improve treatment efficacy. This study sees the potential of 2657 Filipino phytochemicals as a source of natural inhibitors against four targets of diabetes: PTP1B, DPP-4, SGLT-2, and FBPase. Different computer-aided drug discovery techniques, including ADMET profiling, DFT optimization, molecular docking, MD simulations, and MM/PBSA energy calculations, were employed to elucidate the stability and determine the binding affinity of the candidate ligands. Through in silico methods, we have identified seven potential natural inhibitors against PTP1B, DPP-4, and FBPase, and ten against SGLT-2. Eight plants containing at least one natural inhibitor of each protein target were also identified. It is recommended to further investigate the plants' potential to be transformed into a safe and scientifically validated multi-target drug for diabetes therapies.

摘要

目前用于 2 型糖尿病的口服药物针对单一主要生理机制。它们要么激活或抑制受体以提高胰岛素敏感性,增加胰岛素分泌,抑制葡萄糖吸收,要么抑制葡萄糖生成。在晚期,由于单靶点药物疗效有限,可能需要联合治疗;然而,药物变得更加昂贵,而且每种药物联合副作用的风险也在增加。因此,寻找多靶点药物可能是提高治疗效果的最佳策略。本研究认为 2657 种菲律宾植物化学物质有潜力成为针对糖尿病四个靶点(PTP1B、DPP-4、SGLT-2 和 FBPase)的天然抑制剂来源。采用不同的计算机辅助药物发现技术,包括 ADMET 分析、DFT 优化、分子对接、MD 模拟和 MM/PBSA 能量计算,以阐明候选配体的稳定性并确定其结合亲和力。通过计算机模拟方法,我们已经鉴定出七种针对 PTP1B、DPP-4 和 FBPase 的潜在天然抑制剂,以及十种针对 SGLT-2 的抑制剂。还鉴定出 8 种含有每种蛋白质靶标至少一种天然抑制剂的植物。建议进一步研究这些植物的潜力,将其转化为一种安全且经过科学验证的多靶点药物,用于糖尿病治疗。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4a31/10384415/7aafae7b733e/molecules-28-05301-g001.jpg

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