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食管癌术后生存相关因果因素的图形建模。

Graphical modeling of causal factors associated with the postoperative survival of esophageal cancer subjects.

机构信息

Department of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.

Department of Cardiothoracic Surgery, Division of Thoracic and Foregut Surgery, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.

出版信息

Med Phys. 2024 Mar;51(3):1997-2006. doi: 10.1002/mp.16656. Epub 2023 Jul 31.

Abstract

PURPOSE

To clarify the causal relationship between factors contributing to the postoperative survival of patients with esophageal cancer.

METHODS

A cohort of 195 patients who underwent surgery for esophageal cancer between 2008 and 2021 was used in the study. All patients had preoperative chest computed tomography (CT) and positron emission tomography-CT (PET-CT) scans prior to receiving any treatment. From these images, high throughput and quantitative radiomic features, tumor features, and various body composition features were automatically extracted. Causal relationships among these image features, patient demographics, and other clinicopathological variables were analyzed and visualized using a novel score-based directed graph called "Grouped Greedy Equivalence Search" (GGES) while taking prior knowledge into consideration. After supplementing and screening the causal variables, the intervention do-calculus adjustment (IDA) scores were calculated to determine the degree of impact of each variable on survival. Based on this IDA score, a GGES prediction formula was generated. Ten-fold cross-validation was used to assess the performance of the models. The prediction results were evaluated using the R-Squared Score (R score).

RESULTS

The final causal graphical model was formed by two PET-based image variables, ten body composition variables, four pathological variables, four demographic variables, two tumor variables, and one radiological variable (Percentile 10). Intramuscular fat mass was found to have the most impact on overall survival month. Percentile 10 and overall TNM (T: tumor, N: nodes, M: metastasis) stage were identified as direct causes of overall survival (month). The GGES casual model outperformed GES in regression prediction (R  = 0.251) (p < 0.05) and was able to avoid unreasonable causality that may contradict common sense.

CONCLUSION

The GGES causal model can provide a reliable and straightforward representation of the intricate causal relationships among the variables that impact the postoperative survival of patients with esophageal cancer.

摘要

目的

阐明导致食管癌患者术后生存的因素之间的因果关系。

方法

本研究纳入了 195 例 2008 年至 2021 年间接受食管癌手术的患者。所有患者在接受任何治疗前均进行了术前胸部计算机断层扫描(CT)和正电子发射断层扫描-CT(PET-CT)扫描。从这些图像中,自动提取高通量和定量放射组学特征、肿瘤特征和各种身体成分特征。考虑到先验知识,使用一种名为“分组贪婪等价搜索”(GGES)的新型基于评分的有向图分析和可视化这些图像特征、患者人口统计学特征和其他临床病理变量之间的因果关系。在补充和筛选因果变量后,计算干预决策微积分调整(IDA)评分,以确定每个变量对生存的影响程度。基于此 IDA 评分,生成 GGES 预测公式。采用十折交叉验证评估模型性能。使用 R 平方得分(R 得分)评估预测结果。

结果

最终的因果图形模型由两个基于 PET 的图像变量、十个身体成分变量、四个病理变量、四个人口统计学变量、两个肿瘤变量和一个放射学变量(百分位数 10)组成。发现肌肉内脂肪量对总生存月数的影响最大。百分位数 10 和总 TNM(T:肿瘤,N:淋巴结,M:转移)分期被确定为总生存(月)的直接原因。GGES 因果模型在回归预测方面优于 GES(R ²=0.251)(p<0.05),并且能够避免可能与常识相悖的不合理因果关系。

结论

GGES 因果模型可以为影响食管癌患者术后生存的变量之间复杂的因果关系提供可靠且直接的表示。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4a65/10828112/76cc3f0ea910/nihms-1923144-f0001.jpg

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