Nanning Center for Disease Control and Prevention, Nanning, Guangxi, 530023, China.
Collaborative Innovation Centre of Regenerative Medicine and Medical Bioresource Development and Application Co-constructed by the Province and Ministry, Guangxi Medical University, Nanning, China.
Virol J. 2023 Aug 2;20(1):171. doi: 10.1186/s12985-023-02093-0.
Human adenoviruses (HAdV) have been known to cause a range of diseases, including respiratory tract infections (RTIs). However, there is limited information available regarding the genotype diversity and epidemiology of HAdV associated with RTIs in Nanning.
Between June 2019 and December 2021, throat swab, nasal swab, or nasopharyngeal swab samples were obtained from individuals hospitalized with respiratory tract infections (RTIs). Statistical software was used to analyze the epidemiological data. The highly conserved 132-bp gene region of the HAdV hexon was targeted for the detection of HAdV using a qPCR assay. An 875-bp hexon gene fragment was subjected to phylogenetic analysis.
Significant variations were observed in the age and gender distribution of HAdV-positive patients (P = 0.004 and P = 0.025, respectively). The age distribution of HAdV-positive patients showed that 67.89% of those who tested positive were the age group of 0-6 years. Furthermore, the prevalence of HAdV detection was highest during spring and autumn, with a peak in February. Additionally, genotyping of the 36 HAdV-positive samples with 875-bp fragments identified the presence of circulating HAdV species B, C, and E in Nanning between 2019 and 2021.
This study identified an association between HAdV prevalence and age as well as season. Among hospitalized patients with RTIs in Nanning, HAdV-B, HAdV-C, and HAdV-E were found to be co-circulating. The most commonly detected genotypes were HAdV-C1, HAdV-C6, and HAdV-E4.
人类腺病毒(HAdV)可引起多种疾病,包括呼吸道感染(RTIs)。然而,关于与南宁市 RTIs 相关的 HAdV 基因型多样性和流行病学,信息有限。
2019 年 6 月至 2021 年 12 月,采集因呼吸道感染(RTIs)住院的个体的咽喉拭子、鼻拭子或鼻咽拭子样本。使用统计软件分析流行病学数据。使用 qPCR 检测试剂盒检测 HAdV 的高度保守的 132bp 基因区。对 875bp 的六邻体基因片段进行系统发育分析。
HAdV 阳性患者的年龄和性别分布存在显著差异(P=0.004 和 P=0.025)。HAdV 阳性患者的年龄分布显示,67.89%的阳性患者年龄在 0-6 岁之间。此外,HAdV 检测的流行率在春季和秋季最高,2 月达到高峰。此外,对 36 份 875bp 片段的 HAdV 阳性样本进行基因分型,确定了 2019 年至 2021 年间南宁市循环的 HAdV 物种 B、C 和 E。
本研究确定了 HAdV 流行率与年龄和季节之间的关联。在南宁市因 RTIs 住院的患者中,发现 HAdV-B、HAdV-C 和 HAdV-E 同时循环。最常检测到的基因型是 HAdV-C1、HAdV-C6 和 HAdV-E4。