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酶动力学实验中作为底物和抑制剂浓度函数的误差结构

Error structure as a function of substrate and inhibitor concentration in enzyme kinetic experiments.

作者信息

Mannervik B, Jakobson I, Warholm M

出版信息

Biochem J. 1986 May 1;235(3):797-804. doi: 10.1042/bj2350797.

DOI:10.1042/bj2350797
PMID:3753447
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1146758/
Abstract

Optimal design of experiments as well as proper analysis of data are dependent on knowledge of the experimental error. A detailed analysis of the error structure of kinetic data obtained with acetylcholinesterase showed conclusively that the classical assumptions of constant absolute or constant relative error are inadequate for the dependent variable (velocity). The best mathematical models for the experimental error involved the substrate and inhibitor concentrations and reflected the rate law for the initial velocity. Data obtained with other enzymes displayed similar relationships between experimental error and the independent variables. The new empirical error functions were shown superior to previously used models when utilized in weighted non-linear-regression analysis of kinetic data. The results suggest that, in the spectrophotometric assays used in the present study, the observed experimental variance is primarily due to errors in determination of the concentrations of substrate and inhibitor and not to error in measuring the velocity.

摘要

实验的优化设计以及数据的恰当分析取决于对实验误差的了解。对用乙酰胆碱酯酶获得的动力学数据的误差结构进行详细分析,最终表明,关于恒定绝对误差或恒定相对误差的经典假设对于因变量(速度)而言是不充分的。实验误差的最佳数学模型涉及底物和抑制剂浓度,并反映了初始速度的速率定律。用其他酶获得的数据显示出实验误差与自变量之间存在类似的关系。当用于动力学数据的加权非线性回归分析时,新的经验误差函数比以前使用的模型更优越。结果表明,在本研究中使用的分光光度测定法中,观察到的实验方差主要是由于底物和抑制剂浓度测定中的误差,而不是速度测量中的误差。

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本文引用的文献

1
Regression analysis, experimental error, and statistical criteria in the design and analysis of experiments for discrimination between rival kinetic models.用于区分竞争动力学模型的实验设计与分析中的回归分析、实验误差和统计标准。
Methods Enzymol. 1982;87:370-90. doi: 10.1016/s0076-6879(82)87023-7.
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Glutathione transferases: nomenclature.谷胱甘肽转移酶:命名法
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The nature of experimental error in enzyme kinetic measurments.酶动力学测量中实验误差的本质。
Biochem J. 1975 Nov;151(2):361-7. doi: 10.1042/bj1510361.
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A computer program for fitting and statistically analyzing initial rate data applied to bovine hexokinase type III isozyme.一种用于拟合和统计分析应用于牛Ⅲ型己糖激酶同工酶的初始速率数据的计算机程序。
Arch Biochem Biophys. 1975 Oct;170(2):587-600. doi: 10.1016/0003-9861(75)90154-x.
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Error structure of enzyme kinetic experiments. Implications for weighting in regression analysis of experimental data.酶动力学实验的误差结构。对实验数据回归分析中加权的影响。
Eur J Biochem. 1976 Oct 1;69(1):61-7. doi: 10.1111/j.1432-1033.1976.tb10858.x.
6
A steady-state-kinetic random mechanism for glutathione S-transferase A from rat liver. A model involving kinetically significant enzyme-product complexes in the forward reaction.大鼠肝脏谷胱甘肽S-转移酶A的稳态动力学随机机制。一种在前向反应中涉及具有动力学意义的酶-产物复合物的模型。
Eur J Biochem. 1977 Jul 15;77(2):253-62. doi: 10.1111/j.1432-1033.1977.tb11664.x.
7
Purification and characterization of two glutathione S-aryltransferase activities from rat liver.大鼠肝脏中两种谷胱甘肽S-芳基转移酶活性的纯化与鉴定
Biochem J. 1975 Jun;147(3):513-22. doi: 10.1042/bj1470513.
8
Effects of amphiphiles on structure and activity of human erythrocyte membrane acetylcholinesterase.两亲分子对人红细胞膜乙酰胆碱酯酶结构和活性的影响。
Eur J Biochem. 1979 Dec;102(1):59-64. doi: 10.1111/j.1432-1033.1979.tb06262.x.
9
The nature of the random experimental error encountered when acetylcholine hydrolase and alcohol dehydrogenase are assayed.在测定乙酰胆碱水解酶和乙醇脱氢酶时遇到的随机实验误差的性质。
Anal Biochem. 1979 Apr 15;94(2):265-9. doi: 10.1016/0003-2697(79)90358-0.
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