Department of Dynamic and Clinical Psychology and Health Studies, Faculty of Medicine and Psychology, Sapienza University; Unit of Psychiatry, 'Sant'Andrea' University Hospital, Rome, Italy.
Department of Neuroscience, Mental Health and Sensory Organs (NESMOS), Faculty of Medicine and Psychology, Sapienza University; Unit of Psychiatry, 'Sant'Andrea' University Hospital, Rome, Italy.
Curr Neuropharmacol. 2023;21(12):2395-2408. doi: 10.2174/1570159X21666230808170123.
Traditional medicine and biomedical sciences are reaching a turning point because of the constantly growing impact and volume of Big Data. Machine Learning (ML) techniques and related algorithms play a central role as diagnostic, prognostic, and decision-making tools in this field. Another promising area becoming part of everyday clinical practice is personalized therapy and pharmacogenomics. Applying ML to pharmacogenomics opens new frontiers to tailored therapeutical strategies to help clinicians choose drugs with the best response and fewer side effects, operating with genetic information and combining it with the clinical profile. This systematic review aims to draw up the state-of-the-art ML applied to pharmacogenomics in psychiatry. Our research yielded fourteen papers; most were published in the last three years. The sample comprises 9,180 patients diagnosed with mood disorders, psychoses, or autism spectrum disorders. Prediction of drug response and prediction of side effects are the most frequently considered domains with the supervised ML technique, which first requires training and then testing. The random forest is the most used algorithm; it comprises several decision trees, reduces the training set's overfitting, and makes precise predictions. ML proved effective and reliable, especially when genetic and biodemographic information were integrated into the algorithm. Even though ML and pharmacogenomics are not part of everyday clinical practice yet, they will gain a unique role in the next future in improving personalized treatments in psychiatry.
传统医学和生物医学科学由于大数据的不断增长的影响和规模,正处于一个转折点。机器学习(ML)技术和相关算法作为诊断、预后和决策工具,在该领域发挥着核心作用。另一个有前途的领域正在成为日常临床实践的一部分,那就是个性化治疗和药物基因组学。将 ML 应用于药物基因组学为量身定制的治疗策略开辟了新的前沿,帮助临床医生选择反应最佳、副作用最少的药物,利用遗传信息并将其与临床特征相结合。本系统评价旨在总结 ML 在精神病学中的药物基因组学应用的最新技术。我们的研究共产生了 14 篇论文;其中大部分是在过去三年发表的。样本包括 9180 名被诊断为心境障碍、精神病或自闭症谱系障碍的患者。药物反应预测和副作用预测是最常考虑的领域,需要使用监督 ML 技术进行训练和测试。随机森林是最常用的算法;它由多个决策树组成,可以减少训练集的过拟合,并进行精确预测。ML 被证明是有效和可靠的,尤其是当遗传和生物人口统计学信息被整合到算法中时。尽管 ML 和药物基因组学尚未成为日常临床实践的一部分,但在未来,它们将在改善精神病学中的个性化治疗方面发挥独特的作用。