Zhan Jian, Yuan Jing, Liu Jianwei, Zhang Fengming, Yu Fuqiang, Wang Yanliang
The Germplasm Bank of Wild Species, Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China.
Mycology. 2023 Jul 29;14(3):264-274. doi: 10.1080/21501203.2023.2238753. eCollection 2023.
The genus has high edible and medical values, with zones of antagonism often occurring when different species are paired in culture on agar media, while the antagonism-induced metabolic alteration remains unclear. Here, the metabolome of mycelial exudates of two Chinese biological species, C and G, co-cultured or cultured separately was analysed to discover the candidate biomarkers and the key metabolic pathways involved in antagonists. A total of 2,377 metabolites were identified, mainly organic acids and derivatives, lipids and lipid-like molecules, and organoheterocyclic compounds. There were 248 and 142 differentially expressed metabolites between group C-G and C, C-G, and G, respectively, and fourteen common differentially expressed metabolites including malate, uracil, Leu-Gln-Arg, etc. Metabolic pathways like TCA cycle and pyrimidine metabolism were significantly affected by C-G co-culture. Additionally, 156 new metabolites (largely organic acids and derivatives) including 32 potential antifungal compounds, primarily enriched into biosynthesis of secondary metabolites pathways were identified in C-G co-culture mode. We concluded that malate and uracil could be used as the candidate biomarkers, and TCA cycle and pyrimidine metabolism were the key metabolic pathways involved in antagonists. The metabolic changes revealed in this study provide insights into the mechanisms underlying fungal antagonists.
该属具有较高的食用和药用价值,在琼脂培养基上对不同物种进行配对培养时,常出现拮抗区域,而拮抗诱导的代谢变化尚不清楚。在此,分析了两种中国生物物种C和G单独培养或共培养时菌丝体分泌物的代谢组,以发现参与拮抗作用的候选生物标志物和关键代谢途径。共鉴定出2377种代谢物,主要为有机酸及其衍生物、脂质和类脂分子以及有机杂环化合物。C-G组与C组、C-G组与G组之间分别有248种和142种差异表达代谢物,包括苹果酸、尿嘧啶、亮氨酸-谷氨酰胺-精氨酸等14种共同差异表达代谢物。三羧酸循环和嘧啶代谢等代谢途径受C-G共培养的显著影响。此外,在C-G共培养模式中鉴定出156种新的代谢物(主要是有机酸及其衍生物),包括32种潜在的抗真菌化合物,主要富集到次生代谢物生物合成途径中。我们得出结论,苹果酸和尿嘧啶可作为候选生物标志物,三羧酸循环和嘧啶代谢是参与拮抗作用的关键代谢途径。本研究揭示的代谢变化为真菌拮抗作用的潜在机制提供了见解。