The Roslin Institute, Royal (Dick) School of Veterinary Studies, University of Edinburgh , Easter Bush, Midlothian, United Kingdom.
Infection Medicine, University of Edinburgh , Little France Crescent, United Kingdom.
J Virol. 2023 Sep 28;97(9):e0055523. doi: 10.1128/jvi.00555-23. Epub 2023 Sep 5.
investigations of host-virus interactions are reliant on suitable cell and tissue culture models. Results are only as good as the model they are generated in. However, choosing cell models for work often depends on availability and previous use alone. Despite the vast increase in coronavirus research over the past few years, scientists are still heavily reliant on: non-human, highly heterogeneous or not fully differentiated, or naturally unsusceptible cells requiring overexpression of receptors and other accessory factors. Complex primary or stem cell models are highly representative of human tissues but are expensive and time-consuming to develop and maintain with limited suitability for high-throughput experiments.Using tissue-specific expression patterns, we identified human kidney cells as an ideal target for severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) and broader coronavirus infection. We show the use of the well-characterized human kidney cell line Caki-1 for infection with three human coronaviruses (hCoVs): SARS-CoV-2 and Middle Eastern respiratory syndrome coronavirus and hCoV 229E. Caki-1 cells show equal or superior susceptibility to all three coronaviruses when compared to other commonly used cell lines for the cultivation of the respective virus. Antibody staining against SARS-CoV-2 N protein shows comparable replication rates. A panel of 26 custom antibodies shows the location of SARS-CoV-2 proteins during replication using immunocytochemistry. In addition, Caki-1 cells were found to be susceptible to two other human respiratory viruses, influenza A virus and respiratory syncytial virus, making them an ideal model for cross-comparison for a broad range of respiratory viruses. IMPORTANCE Cell lines remain the backbone of virus research, but results are only as good as their originating model. Despite increased research into human coronaviruses following the COVID-19 pandemic, researchers continue to rely on suboptimal cell line models of: non-human origin, incomplete differentiation, or lacking active interferon responses. We identified the human kidney Caki-1 cell line as a potential target for severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2). This cell line could be shown to be infectable with a wide range of coronaviruses including common cold virus hCoV-229E, epidemic virus MERS-CoV, and SARS-CoV-2 as well as other important respiratory viruses influenza A virus and respiratory syncytial virus. We could show the localization of 26 SARS-CoV-2 proteins in Caki-1 cells during natural replication and the cells are competent of forming a cellular immune response. Together, this makes Caki-1 cells a unique tool for cross-virus comparison in one cell line.
宿主-病毒相互作用的研究依赖于合适的细胞和组织培养模型。结果的好坏取决于产生结果的模型。然而,选择用于工作的细胞模型通常仅取决于可用性和先前的使用情况。尽管在过去几年中冠状病毒研究有了巨大的增长,但科学家仍然严重依赖于:非人类、高度异质或不完全分化的、或自然不易感的细胞,这些细胞需要过表达受体和其他辅助因子。复杂的原代或干细胞模型高度代表人类组织,但开发和维持成本高且耗时,不适合高通量实验。
我们利用组织特异性表达模式,确定人肾细胞是严重急性呼吸综合征冠状病毒 2(SARS-CoV-2)和更广泛的冠状病毒感染的理想靶标。我们展示了使用经过充分表征的人肾细胞系 Caki-1 感染三种人类冠状病毒(hCoVs):SARS-CoV-2 和中东呼吸综合征冠状病毒和 hCoV 229E。与用于培养各自病毒的其他常用细胞系相比,Caki-1 细胞对所有三种冠状病毒的易感性相等或更高。针对 SARS-CoV-2 N 蛋白的抗体染色显示出可比的复制率。一组 26 种定制抗体通过免疫细胞化学显示 SARS-CoV-2 蛋白在复制过程中的位置。此外,Caki-1 细胞易感染两种其他人类呼吸道病毒,流感病毒和呼吸道合胞病毒,使其成为广泛呼吸道病毒的交叉比较的理想模型。
细胞系仍然是病毒研究的支柱,但结果的好坏取决于其原始模型。尽管 COVID-19 大流行后对人类冠状病毒的研究有所增加,但研究人员继续依赖于非人类起源、不完全分化或缺乏活跃干扰素反应的次优细胞系模型。我们确定人肾 Caki-1 细胞系是严重急性呼吸综合征冠状病毒-2(SARS-CoV-2)的潜在靶标。可以证明这种细胞系可以感染多种冠状病毒,包括普通感冒病毒 hCoV-229E、流行病毒 MERS-CoV 和 SARS-CoV-2 以及其他重要的呼吸道病毒流感病毒和呼吸道合胞病毒。我们可以显示 26 种 SARS-CoV-2 蛋白在 Caki-1 细胞中的自然复制过程中的定位,并且这些细胞能够形成细胞免疫反应。总的来说,这使得 Caki-1 细胞成为一种独特的工具,可在一个细胞系中进行跨病毒比较。