College of Marine Life Sciences, Ocean University of China, Qingdao, Shandong, 266003, PR China.
Key Laboratory of Marine Drugs, Ministry of Education, School of Medicine and Pharmacy, Shandong Provincial Key Laboratory of Glycoscience and Glycotechnology, Ocean University of China, Qingdao, 266003, PR China.
Int J Syst Evol Microbiol. 2023 Sep;73(9). doi: 10.1099/ijsem.0.006037.
An exopolysaccharide-producing bacterial strain GW4-15, belonging to the genus , was isolated from intertidal sediment from King George Island, Antarctic. The strain was Gram-stain-negative, aerobic, rod-shaped, non-motile and yellow-pigmented. The strain was able to grow in the presence of 0-2 % (w/v) NaCl (optimum, 0 %), at 4-30 °C (optimum, 20-28 °C) and at pH 5.0-10.0 (optimum, pH 8.0). A phylogenetic tree based on 16S rRNA gene sequences showed that strain GW4-15 formed a lineage within the genus with the closest phylogenetic neighbours NCTC 13525 (98.3 %), G5-32 (97.7 %), LMG 24720 (97.4 %) and HMD1043 (96.9 %). Digital DNA-DNA hybridization values of strain GW4-15 with NCTC 13525, LMG 24720, G5-32 and HMD1043 were 22.8, 22.0, 21.7 and 21.6 %, respectively. The average nucleotide identity values between strain GW4-15 and NCTC 13525 LMG 24720, G5-32 and HMD1043 were 79.3, 78.6, 77.5 and 77.2 %, respectively. The G+C content of the genome was 36.2 mol%. The major phospholipids were phosphatidylethanolamine and aminophospholipid. The predominant menaquinone was MK-6. The major fatty acids were anteiso-C (28.7 %), iso-C 3-OH (15.7 %), iso-C H (10.0 %), iso-C (5.4 %), summed feature 9 (comprising iso-C 9 and/or 10-methyl C; 5.2 %) and iso-C (5.1 %). The monosaccharide composition of the new type of extracellular polymeric of GW4-15 was Glc, GalN, GlcN, Rha, Man and Gal with a molar ratio of 3.14 : 3.83 : 8.38 : 5.16 : 1 : 2.82. Based on phenotypic, phylogenetic and genotypic data, a novel species, sp. nov., is proposed with the type strain GW4-15 (=CGMCC 1.19368=KCTC 92753).
一株产胞外多糖的细菌菌株 GW4-15,属于 属,从南极乔治王岛的潮间沉积物中分离出来。该菌株革兰氏阴性,需氧,杆状,不运动,呈黄色。该菌株能够在 0-2%(w/v)NaCl(最佳,0%)、4-30°C(最佳,20-28°C)和 pH 5.0-10.0(最佳,pH 8.0)的条件下生长。基于 16S rRNA 基因序列的系统发育树显示,菌株 GW4-15与 属中的近缘种 NCTC 13525(98.3%)、G5-32(97.7%)、LMG 24720(97.4%)和 HMD1043(96.9%)形成一个分支。菌株 GW4-15 与 NCTC 13525、LMG 24720、G5-32 和 HMD1043 的数字 DNA-DNA 杂交值分别为 22.8%、22.0%、21.7%和 21.6%。菌株 GW4-15 与 NCTC 13525、LMG 24720、G5-32 和 HMD1043 的平均核苷酸同一性值分别为 79.3%、78.6%、77.5%和 77.2%。基因组的 G+C 含量为 36.2mol%。主要磷脂为磷脂酰乙醇胺和氨基磷脂。主要的类异戊二烯醌为 MK-6。主要脂肪酸为 anteiso-C(28.7%)、iso-C 3-OH(15.7%)、iso-C(10.0%)、iso-C(5.4%)、summed feature 9(包含 iso-C 9 和/或 10-甲基 C;5.2%)和 iso-C(5.1%)。GW4-15 新型胞外聚合物的单糖组成是 Glc、GalN、GlcN、Rha、Man 和 Gal,摩尔比为 3.14:3.83:8.38:5.16:1:2.82。基于表型、系统发育和基因型数据,提出了一个新的物种,即 sp. nov.,其模式菌株为 GW4-15(=CGMCC 1.19368=KCTC 92753)。