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对1型糖尿病生物标志物的系统评价揭示了与补体、脂质代谢和免疫反应相关的循环蛋白中的调节作用。

Systematic review of type 1 diabetes biomarkers reveals regulation in circulating proteins related to complement, lipid metabolism, and immune response.

作者信息

Sarkar Soumyadeep, Elliott Emily C, Henry Hayden R, Ludovico Ivo Díaz, Melchior John T, Frazer-Abel Ashley, Webb-Robertson Bobbie-Jo, Davidson W Sean, Holers V Michael, Rewers Marian J, Metz Thomas O, Nakayasu Ernesto S

机构信息

Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, USA.

Department of Pathology and Laboratory Medicine, University of Cincinnati College of Medicine, Cincinnati, OH, USA.

出版信息

Clin Proteomics. 2023 Sep 21;20(1):38. doi: 10.1186/s12014-023-09429-6.

Abstract

BACKGROUND

Type 1 diabetes (T1D) results from an autoimmune attack of the pancreatic β cells that progresses to dysglycemia and symptomatic hyperglycemia. Current biomarkers to track this evolution are limited, with development of islet autoantibodies marking the onset of autoimmunity and metabolic tests used to detect dysglycemia. Therefore, additional biomarkers are needed to better track disease initiation and progression. Multiple clinical studies have used proteomics to identify biomarker candidates. However, most of the studies were limited to the initial candidate identification, which needs to be further validated and have assays developed for clinical use. Here we curate these studies to help prioritize biomarker candidates for validation studies and to obtain a broader view of processes regulated during disease development.

METHODS

This systematic review was registered with Open Science Framework ( https://doi.org/10.17605/OSF.IO/N8TSA ). Using PRISMA guidelines, we conducted a systematic search of proteomics studies of T1D in the PubMed to identify putative protein biomarkers of the disease. Studies that performed mass spectrometry-based untargeted/targeted proteomic analysis of human serum/plasma of control, pre-seroconversion, post-seroconversion, and/or T1D-diagnosed subjects were included. For unbiased screening, 3 reviewers screened all the articles independently using the pre-determined criteria.

RESULTS

A total of 13 studies met our inclusion criteria, resulting in the identification of 266 unique proteins, with 31 (11.6%) being identified across 3 or more studies. The circulating protein biomarkers were found to be enriched in complement, lipid metabolism, and immune response pathways, all of which are found to be dysregulated in different phases of T1D development. We found 2 subsets: 17 proteins (C3, C1R, C8G, C4B, IBP2, IBP3, ITIH1, ITIH2, BTD, APOE, TETN, C1S, C6A3, SAA4, ALS, SEPP1 and PI16) and 3 proteins (C3, CLUS and C4A) have consistent regulation in at least 2 independent studies at post-seroconversion and post-diagnosis compared to controls, respectively, making them strong candidates for clinical assay development.

CONCLUSIONS

Biomarkers analyzed in this systematic review highlight alterations in specific biological processes in T1D, including complement, lipid metabolism, and immune response pathways, and may have potential for further use in the clinic as prognostic or diagnostic assays.

摘要

背景

1型糖尿病(T1D)是由胰腺β细胞的自身免疫攻击引起的,这种攻击会发展为血糖异常和症状性高血糖。目前用于追踪这种疾病进展的生物标志物有限,胰岛自身抗体的出现标志着自身免疫的开始,而代谢测试则用于检测血糖异常。因此,需要额外的生物标志物来更好地追踪疾病的起始和进展。多项临床研究已使用蛋白质组学来鉴定生物标志物候选物。然而,大多数研究仅限于最初的候选物鉴定,这些候选物需要进一步验证并开发用于临床的检测方法。在此,我们整理这些研究,以帮助确定生物标志物候选物的优先级,用于验证研究,并更全面地了解疾病发展过程中受调控的过程。

方法

本系统评价已在开放科学框架(https://doi.org/10.17605/OSF.IO/N8TSA)注册。我们按照PRISMA指南,在PubMed中对T1D的蛋白质组学研究进行了系统检索,以确定该疾病的推定蛋白质生物标志物。纳入了对对照、血清转化前、血清转化后和/或T1D诊断患者的人血清/血浆进行基于质谱的非靶向/靶向蛋白质组学分析的研究。为了进行无偏筛选,3名评审员使用预先确定的标准独立筛选了所有文章。

结果

共有13项研究符合我们的纳入标准,共鉴定出266种独特的蛋白质,其中31种(11.6%)在3项或更多研究中被鉴定出来。发现循环蛋白质生物标志物在补体、脂质代谢和免疫反应途径中富集,所有这些在T1D发展的不同阶段均被发现失调。我们发现了2个子集:17种蛋白质(C3、C1R、C8G、C4B、IBP2、IBP3、ITIH1、ITIH2、BTD、APOE、TETN、C1S、C6A3、SAA4、ALS、SEPP1和PI16)和3种蛋白质(C3、CLUS和C4A),与对照组相比,分别在血清转化后和诊断后至少2项独立研究中具有一致的调控,这使其成为临床检测方法开发的有力候选物。

结论

本系统评价中分析的生物标志物突出了T1D中特定生物学过程的改变,包括补体、脂质代谢和免疫反应途径,并且可能在临床上作为预后或诊断检测方法有进一步应用的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e22/10512508/fc9cdd4bbed8/12014_2023_9429_Fig1_HTML.jpg

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