Averina Olga V, Kovtun Aleksey S, Mavletova Dilara A, Ziganshin Rustam H, Danilenko Valery N, Mihaylova Dasha, Blazheva Denica, Slavchev Aleksandar, Brazkova Mariya, Ibrahim Salam A, Krastanov Albert
Vavilov Institute of General Genetics, Russian Academy of Sciences, 119991 Moscow, Russia.
Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russia.
Foods. 2023 Sep 7;12(18):3356. doi: 10.3390/foods12183356.
is a predominant and important genus in the bacterial population of the human gut microbiota. Despite the increasing number of studies on the beneficial functionality of bifidobacteria for human health, knowledge about their antioxidant potential is still insufficient. Several in vivo and in vitro studies of strains and their cellular components have shown good antioxidant capacity that provided a certain protection of their own and the host's cells. Our work presents the data of transcriptomic, proteomic, and metabolomic analyses of the growing and stationary culture of the probiotic strain subsp. GT15 after exposure to hydrogen peroxide for 2 h and oxygen for 2 and 4 h. The results of the analysis of the sequenced genome of GT15 showed the presence of 16 gene-encoding proteins with known antioxidant functions. The results of the full transcriptomic analysis demonstrated a more than two-fold increase of levels of transcripts for eleven genes, encoding proteins with antioxidant functions. Proteomic data analysis showed an increased level of more than two times for glutaredoxin and thioredoxin after the exposure to oxygen, which indicates that the thioredoxin-dependent antioxidant system may be the major redox homeostasis system in bacteria. We also found that the levels of proteins presumably involved in global stress, amino acid metabolism, nucleotide and carbohydrate metabolism, and transport had significantly increased in response to oxidative stress. The metabolic fingerprint analysis also showed good discrimination between cells responding to oxidative stress and the untreated controls. Our results provide a greater understanding of the mechanism of oxidative stress response in and the factors that contribute to its survival in functional food products.
双歧杆菌属是人类肠道微生物群细菌种群中的一个主要且重要的属。尽管关于双歧杆菌对人类健康有益功能的研究数量不断增加,但关于其抗氧化潜力的知识仍然不足。对双歧杆菌菌株及其细胞成分的多项体内和体外研究表明,它们具有良好的抗氧化能力,能为自身和宿主细胞提供一定保护。我们的研究展示了益生菌菌株嗜热双歧杆菌亚种GT15在暴露于过氧化氢2小时以及氧气2小时和4小时后的生长和稳定期培养物的转录组学、蛋白质组学和代谢组学分析数据。嗜热双歧杆菌GT15测序基因组的分析结果显示存在16个编码具有已知抗氧化功能蛋白质的基因。全转录组分析结果表明,11个编码具有抗氧化功能蛋白质的基因的转录本水平增加了两倍多。蛋白质组数据分析显示,暴露于氧气后,谷氧还蛋白和硫氧还蛋白的水平增加了两倍多,这表明硫氧还蛋白依赖性抗氧化系统可能是嗜热双歧杆菌中的主要氧化还原稳态系统。我们还发现,可能参与全局应激、氨基酸代谢、核苷酸和碳水化合物代谢以及转运的蛋白质水平在氧化应激反应中显著增加。代谢指纹分析也显示,对氧化应激作出反应的细胞与未处理的对照之间有良好的区分。我们的研究结果有助于更深入地了解嗜热双歧杆菌的氧化应激反应机制以及有助于其在功能性食品中存活的因素。