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新种,从狗粪便中分离得到。

sp. nov., isolated from dog feces.

作者信息

Wang Hairui, Gu Yixin, Zhou Guilan, Chen Xiaoli, Zhang Xin, Shao Zhujun, Zhang Maojun

机构信息

State Key Laboratory for Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.

出版信息

Front Genet. 2023 Sep 26;14:1240581. doi: 10.3389/fgene.2023.1240581. eCollection 2023.

Abstract

In 2019, two distinct bacterial isolates were independently isolated from the fecal samples of separate dogs in Beijing, China. These cells exhibit microaerobic, are Gram-negative, motile, and possess a characteristic spiral shape with bipolar single flagellum. They display positive results for the oxidase test while being negative for both catalase and urease. These organisms measure approximately 0.2-0.3 μm in width and 4.5-6 μm in length. The colonies are wet, flat, grey, circular, and smooth with sizes ranging from 1 to 2 mm in diameter after 2 days of growth. However, strains may exhibit variations in size and morphology following extended incubation. Phylogenetic analyses based on the 16S rRNA gene and core genome indicated that these two isolates belong to the genus and formed a robust clade that was remains distinctly separate from currently recognized species. These two isolates shared low dDDH relatedness and ANI values with their closest species CCUG 32756, with these values falling below the commonly cutoff values for strains of the same species. The genomic DNA G + C contents of strain XJK30-2 were 44.93 mol%. Comparing the phenotypic and phylogenetic features between these two isolates and their closely related species, XJK30-2 represents a novel species within the genus , for which the name sp. nov. (Type strain XJK30-2 = GDMCC 1.3695) is proposed.

摘要

2019年,从中国北京不同犬类的粪便样本中独立分离出两种不同的细菌菌株。这些细胞呈现微需氧,革兰氏阴性,具运动性,呈特征性螺旋形且有双极单鞭毛。氧化酶试验呈阳性,而过氧化氢酶和脲酶试验均呈阴性。这些生物体宽度约为0.2 - 0.3μm,长度为4.5 - 6μm。菌落湿润、扁平、灰色、圆形且光滑,生长2天后直径范围为1至2mm。然而,延长培养后菌株的大小和形态可能会出现变化。基于16S rRNA基因和核心基因组的系统发育分析表明,这两种分离株属于该属,形成了一个强大的进化枝,与目前已识别的物种明显分开。这两种分离株与其最接近的物种CCUG 32756的dDDH相关性和ANI值较低,这些值低于同一物种菌株的常用截止值。菌株XJK30 - 2的基因组DNA G + C含量为44.93mol%。比较这两种分离株与其密切相关物种的表型和系统发育特征,XJK30 - 2代表该属内的一个新物种,为此提出名称为sp. nov.(模式菌株XJK30 - 2 = GDMCC 1.3695)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc4e/10562538/6f2e056bf792/fgene-14-1240581-g001.jpg

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