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3'剪接因子介导的可变剪接对开花时间和其他发育可塑性的调控 于……中

Regulation of Flowering Time and Other Developmental Plasticities by 3' Splicing Factor-Mediated Alternative Splicing in .

作者信息

Lee Keh Chien, Kim Young-Cheon, Kim Jeong-Kook, Lee Horim, Lee Jeong Hwan

机构信息

Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, 90183 Umeå, Sweden.

Division of Life Sciences, Jeonbuk National University, 567 Baekje-daero, Deokjin-gu, Jeonju 54896, Jeollabuk-do, Republic of Korea.

出版信息

Plants (Basel). 2023 Oct 9;12(19):3508. doi: 10.3390/plants12193508.

DOI:10.3390/plants12193508
PMID:37836248
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10575287/
Abstract

Plants, as sessile organisms, show a high degree of plasticity in their growth and development and have various strategies to cope with these alterations under continuously changing environments and unfavorable stress conditions. In particular, the floral transition from the vegetative and reproductive phases in the shoot apical meristem (SAM) is one of the most important developmental changes in plants. In addition, meristem regions, such as the SAM and root apical meristem (RAM), which continually generate new lateral organs throughout the plant life cycle, are important sites for developmental plasticity. Recent findings have shown that the prevailing type of alternative splicing (AS) in plants is intron retention (IR) unlike in animals; thus, AS is an important regulatory mechanism conferring plasticity for plant growth and development under various environmental conditions. Although eukaryotes exhibit some similarities in the composition and dynamics of their splicing machinery, plants have differences in the 3' splicing characteristics governing AS. Here, we summarize recent findings on the roles of 3' splicing factors and their interacting partners in regulating the flowering time and other developmental plasticities in .

摘要

植物作为固着生物,在其生长发育过程中表现出高度的可塑性,并具有多种策略来应对不断变化的环境和不利胁迫条件下的这些变化。特别是,茎尖分生组织(SAM)中从营养生长阶段到生殖阶段的花期转变是植物最重要的发育变化之一。此外,分生组织区域,如SAM和根尖分生组织(RAM),在植物整个生命周期中持续产生新的侧生器官,是发育可塑性的重要位点。最近的研究结果表明,与动物不同,植物中主要的可变剪接(AS)类型是内含子保留(IR);因此,AS是一种重要的调控机制,赋予植物在各种环境条件下生长发育的可塑性。尽管真核生物在其剪接机制的组成和动态方面表现出一些相似性,但植物在调控AS的3'剪接特征方面存在差异。在这里,我们总结了关于3'剪接因子及其相互作用伙伴在调控开花时间和其他发育可塑性方面作用的最新研究结果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b15b/10575287/3a6e98726379/plants-12-03508-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b15b/10575287/24e940630fce/plants-12-03508-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b15b/10575287/77f7bbca3692/plants-12-03508-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b15b/10575287/44c863f858fe/plants-12-03508-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b15b/10575287/3a6e98726379/plants-12-03508-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b15b/10575287/24e940630fce/plants-12-03508-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b15b/10575287/77f7bbca3692/plants-12-03508-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b15b/10575287/44c863f858fe/plants-12-03508-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b15b/10575287/3a6e98726379/plants-12-03508-g004.jpg

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本文引用的文献

1
Two Splicing Factors, U2AF65a and U2AF65b, Differentially Control Flowering Time by Modulating the Expression or Alternative Splicing of a Subset of Upstream Regulators.两种剪接因子U2AF65a和U2AF65b通过调节上游调控因子子集的表达或可变剪接来差异控制开花时间。
Plants (Basel). 2023 Apr 14;12(8):1655. doi: 10.3390/plants12081655.
2
Alternative splicing in plants: current knowledge and future directions for assessing the biological relevance of splice variants.植物中的可变剪接:评估剪接变体生物学相关性的当前知识与未来方向
J Exp Bot. 2023 Apr 9;74(7):2251-2272. doi: 10.1093/jxb/erac431.
3
Alternative Splicing and Its Roles in Plant Metabolism.
可变剪接及其在植物代谢中的作用。
Int J Mol Sci. 2022 Jul 1;23(13):7355. doi: 10.3390/ijms23137355.
4
SKI-INTERACTING PROTEIN interacts with SHOOT MERISTEMLESS to regulate shoot apical meristem formation.SKI 相互作用蛋白与 SHOOT 分生组织无关蛋白相互作用,以调节茎尖分生组织的形成。
Plant Physiol. 2022 Aug 1;189(4):2193-2209. doi: 10.1093/plphys/kiac241.
5
The splicing factor 1-FLOWERING LOCUS M module spatially regulates temperature-dependent flowering by modulating FLOWERING LOCUS T and LEAFY expression.剪接因子 1-FLOWERING LOCUS M 模块通过调节 FLOWERING LOCUS T 和 LEAFY 的表达来空间调节温度依赖性开花。
Plant Cell Rep. 2022 Jul;41(7):1603-1612. doi: 10.1007/s00299-022-02881-y. Epub 2022 May 19.
6
Rapid Regulation of Alternative Splicing in Response to Environmental Stresses.响应环境胁迫时可变剪接的快速调控
Front Plant Sci. 2022 Mar 4;13:832177. doi: 10.3389/fpls.2022.832177. eCollection 2022.
7
Structural basis of branch site recognition by the human spliceosome.人类剪接体识别分支位点的结构基础。
Science. 2022 Jan 7;375(6576):50-57. doi: 10.1126/science.abm4245. Epub 2021 Nov 25.
8
Role of Splicing factor SF1 in Temperature-Responsive Alternative Splicing of pre-mRNA.剪接因子SF1在mRNA前体的温度响应性可变剪接中的作用
Front Plant Sci. 2020 Dec 1;11:596354. doi: 10.3389/fpls.2020.596354. eCollection 2020.
9
The pre-mRNA splicing factor RDM16 regulates root stem cell maintenance in Arabidopsis.前体mRNA剪接因子RDM16调控拟南芥根尖干细胞的维持。
J Integr Plant Biol. 2021 Apr;63(4):662-678. doi: 10.1111/jipb.13006. Epub 2020 Sep 16.
10
SPLICING FACTOR1 Is Important in Chloroplast Development under Cold Stress.剪接因子 1 在冷胁迫下的叶绿体发育中很重要。
Plant Physiol. 2020 Oct;184(2):973-987. doi: 10.1104/pp.20.00706. Epub 2020 Jul 30.