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用于控制细胞中肌动蛋白结合的开启型蛋白质开关。

Turn-On Protein Switches for Controlling Actin Binding in Cells.

作者信息

Effiong Unyime M, Khairandish Hannah, Ramirez-Velez Isabela, Wang Yanran, Belardi Brian

机构信息

McKetta Department of Chemical Engineering, The University of Texas at Austin, Austin, TX 78712.

出版信息

bioRxiv. 2023 Oct 26:2023.10.26.561921. doi: 10.1101/2023.10.26.561921.

Abstract

Within a shared cytoplasm, filamentous actin (F-actin) plays numerous and critical roles across the cell body. Cells rely on actin-binding proteins (ABPs) to organize F-actin and to integrate its polymeric characteristics into diverse cellular processes. Yet, the multitude of ABPs that engage with and shape F-actin make studying a single ABP's influence on cellular activities a significant challenge. Moreover, without a means of manipulating actin-binding subcellularly, harnessing the F-actin cytoskeleton for synthetic biology purposes remains elusive. Here, we describe a suite of designed proteins, Controllable Actin-binding Switch Tools (CASTs), whose actin-binding behavior can be controlled with external stimuli. CASTs were developed that respond to different external inputs, providing options for turn-on kinetics and enabling orthogonality. Being genetically encoded, we show that CASTs can be inserted into native protein sequences to control F-actin association locally and engineered into new structures to control cell and tissue shape and behavior.

摘要

在共享的细胞质中,丝状肌动蛋白(F-肌动蛋白)在整个细胞体中发挥着众多关键作用。细胞依靠肌动蛋白结合蛋白(ABP)来组织F-肌动蛋白,并将其聚合特性整合到各种细胞过程中。然而,众多与F-肌动蛋白相互作用并塑造其形态的ABP使得研究单个ABP对细胞活动的影响成为一项重大挑战。此外,由于缺乏在亚细胞水平上操纵肌动蛋白结合的方法,利用F-肌动蛋白细胞骨架用于合成生物学目的仍然难以实现。在这里,我们描述了一组经过设计的蛋白质,即可控肌动蛋白结合开关工具(CASTs),其肌动蛋白结合行为可以通过外部刺激进行控制。开发出的CASTs能对不同的外部输入做出反应,为开启动力学提供了选择,并实现了正交性。由于是基因编码的,我们表明CASTs可以插入到天然蛋白质序列中以局部控制F-肌动蛋白的结合,还可以工程化为新的结构以控制细胞和组织的形状及行为。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cbee/10634840/e60c7d6e49d1/nihpp-2023.10.26.561921v1-f0001.jpg

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