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Diversification of small RNA pathways underlies germline RNA interference incompetence in wild Caenorhabditis elegans strains.小 RNA 通路的多样化是野生型秀丽隐杆线虫生殖系 RNA 干扰无能的基础。
Genetics. 2024 Jan 3;226(1). doi: 10.1093/genetics/iyad191.
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Interspecies effectors of a transgenerational memory of bacterial infection in .跨物种的细菌感染代际记忆效应因子
iScience. 2022 Jun 17;25(7):104627. doi: 10.1016/j.isci.2022.104627. eCollection 2022 Jul 15.
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Inheritance and maintenance of small RNA-mediated epigenetic effects.小 RNA 介导的表观遗传效应的遗传和维持。
Bioessays. 2022 Jun;44(6):e2100284. doi: 10.1002/bies.202100284. Epub 2022 Mar 25.
4
Mutation, selection, and the prevalence of the Caenorhabditis elegans heat-sensitive mortal germline phenotype.秀丽隐杆线虫热敏感致死生殖系表型的突变、选择与流行率
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5
Germ granules and gene regulation in the Caenorhabditis elegans germline.生殖质与线虫生殖系中的基因调控。
Genetics. 2022 Mar 3;220(3). doi: 10.1093/genetics/iyab195.
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Histone H3K4me3 modification is a transgenerational epigenetic signal for lipid metabolism in Caenorhabditis elegans.组蛋白 H3K4me3 修饰是秀丽隐杆线虫脂质代谢的跨代表观遗传信号。
Nat Commun. 2022 Feb 9;13(1):768. doi: 10.1038/s41467-022-28469-4.
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WormBase in 2022-data, processes, and tools for analyzing Caenorhabditis elegans.2022 年的 WormBase:用于分析秀丽隐杆线虫的数据库、流程和工具。
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Aging Cell. 2022 Jan;21(1):e13518. doi: 10.1111/acel.13518. Epub 2021 Dec 8.
10
Loss of SET1/COMPASS methyltransferase activity reduces lifespan and fertility in .SET1/COMPASS 甲基转移酶活性的丧失会缩短寿命和降低. 的生育能力。
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全基因组关联分析和环境抑制野生秀丽隐杆线虫生殖系表型的致死性。

Genome-wide association and environmental suppression of the mortal germline phenotype of wild C. elegans.

机构信息

Institut de Biologie de l'Ecole Normale Supérieure, CNRS, Inserm, Paris, France.

出版信息

EMBO Rep. 2023 Dec 6;24(12):e58116. doi: 10.15252/embr.202358116. Epub 2023 Nov 20.

DOI:10.15252/embr.202358116
PMID:37983674
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10702804/
Abstract

The animal germline lineage needs to be maintained along generations. However, some Caenorhabditis elegans wild isolates display a mortal germline phenotype, leading to sterility after several generations at 25°C. Using a genome-wide association approach, we detect a significant peak on chromosome III around 5 Mb, confirmed by introgressions. Thus, a seemingly deleterious genotype is maintained at intermediate frequency in the species. Environmental rescue is a likely explanation, and indeed associated bacteria and microsporidia suppress the phenotype of wild isolates as well as mutants in small RNA inheritance (nrde-2) and histone modifications (set-2). Escherichia coli strains of the K-12 lineage suppress the phenotype compared to B strains. By shifting a wild strain from E. coli K-12 to E. coli B, we find that memory of the suppressing condition is maintained over several generations. Thus, the mortal germline phenotype of wild C. elegans is in part revealed by laboratory conditions and may represent variation in epigenetic inheritance and environmental interactions. This study also points to the importance of non-genetic memory in the face of environmental variation.

摘要

动物生殖系谱系需要沿着世代维持。然而,一些秀丽隐杆线虫野生分离株表现出致命的生殖系表型,在 25°C 下经过几代后导致不育。使用全基因组关联方法,我们在染色体 III 上大约 5Mb 处检测到一个显著的峰,通过导入得到证实。因此,一种看似有害的基因型在物种中以中等频率维持。环境拯救是一个可能的解释,事实上,相关细菌和微孢子虫抑制了野生分离株的表型,以及小 RNA 遗传(nrde-2)和组蛋白修饰(set-2)突变体的表型。与 B 株相比,K-12 谱系的大肠杆菌菌株抑制了表型。通过将野生菌株从大肠杆菌 K-12 转移到大肠杆菌 B,我们发现抑制条件的记忆在几代中得以维持。因此,野生秀丽隐杆线虫致命的生殖系表型部分是由实验室条件揭示的,可能代表了表观遗传遗传和环境相互作用的变异。这项研究还指出了在面对环境变化时非遗传记忆的重要性。