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某植物中生长素编码基因家族的分析及其跨物种表达对野生植物耐涝性的调节

Analysis of Auxin-Encoding Gene Family in and It's Cross-Species Expression Modulating Waterlogging Tolerance in Wild .

作者信息

Singh Chandra Mohan, Purwar Shalini, Singh Akhilesh Kumar, Singh Bhupendra Kumar, Kumar Mukul, Kumar Hitesh, Pratap Aditya, Mishra Awdhesh Kumar, Baek Kwang-Hyun

机构信息

Department of Genetics and Plant Breeding, Banda University of Agriculture and Technology, Banda 210 001, India.

Department of Basic and Social Sciences, Banda University of Agriculture and Technology, Banda 210 001, India.

出版信息

Plants (Basel). 2023 Nov 15;12(22):3858. doi: 10.3390/plants12223858.

DOI:10.3390/plants12223858
PMID:38005755
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10674698/
Abstract

Mungbean is known to be susceptible to waterlogging (WL) stress. Some of the wild species have the potential to tolerate this through various physiological and molecular mechanisms. (ARF) and (AUX/IAA), an early responsive gene family, has multiple functions in growth, development, and stress tolerance. Here, we report the first comprehensive analysis of the ARF and AUX/IAA gene family in mungbean. A total of 26 ARF and 19 AUX/IAA genes were identified from the mungbean genome. The ARF and AUX/IAA candidates were clearly grouped into two major clades. Further, the subgrouping within the major clades indicated the presence of significant diversity. The gene structure, motif analysis, and protein characterization provided the clue for further fundamental research. Out of the10 selected candidate genes, , , , and were found to significantly multiple-fold gene expression in the hypocotyl region of WL-tolerant wild relatives (PRR 2008-2) provides new insight into a role in the induction of lateral root formation under WL stress. The analysis provides an insight into the structural diversity of ARF and AUX/IAA genes in mungbean. These results increase our understanding of ARF and AUX/IAA genes and therefore offer robust information for functional investigations, which can be taken up in the future and will form a foundation for improving tolerance against waterlogging stress.

摘要

已知绿豆易受涝渍（WL）胁迫影响。一些野生品种有潜力通过各种生理和分子机制来耐受这种胁迫。（ARF）和（AUX/IAA）作为一个早期响应基因家族，在生长、发育和胁迫耐受性方面具有多种功能。在此，我们报告了对绿豆中ARF和AUX/IAA基因家族的首次全面分析。从绿豆基因组中总共鉴定出26个ARF基因和19个AUX/IAA基因。ARF和AUX/IAA候选基因明显分为两个主要进化枝。此外，主要进化枝内的亚分组表明存在显著的多样性。基因结构、基序分析和蛋白质特征为进一步的基础研究提供了线索。在10个选定的候选基因中，发现[此处原文缺失具体基因名称]在耐涝野生近缘种（PRR 2008 - 2）的下胚轴区域中基因表达显著多倍增加，这为其在涝渍胁迫下诱导侧根形成中的作用提供了新见解。该分析深入了解了绿豆中ARF和AUX/IAA基因的结构多样性。这些结果增进了我们对ARF和AUX/IAA基因的理解，因此为功能研究提供了有力信息，这些研究可在未来开展，并将为提高对涝渍胁迫的耐受性奠定基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d682/10674698/cbb78b476f38/plants-12-03858-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d682/10674698/054ad38ad1e1/plants-12-03858-g001a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d682/10674698/a95d52faf557/plants-12-03858-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d682/10674698/e18fd2ae3f7c/plants-12-03858-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d682/10674698/e3b67897c043/plants-12-03858-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d682/10674698/ac619c529dd9/plants-12-03858-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d682/10674698/917c3e498ab7/plants-12-03858-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d682/10674698/cb1ee0e67de7/plants-12-03858-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d682/10674698/8ecfbabf2190/plants-12-03858-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d682/10674698/cbb78b476f38/plants-12-03858-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d682/10674698/054ad38ad1e1/plants-12-03858-g001a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d682/10674698/a95d52faf557/plants-12-03858-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d682/10674698/e18fd2ae3f7c/plants-12-03858-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d682/10674698/e3b67897c043/plants-12-03858-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d682/10674698/ac619c529dd9/plants-12-03858-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d682/10674698/917c3e498ab7/plants-12-03858-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d682/10674698/cb1ee0e67de7/plants-12-03858-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d682/10674698/8ecfbabf2190/plants-12-03858-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d682/10674698/cbb78b476f38/plants-12-03858-g009.jpg

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