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一种基于变压器的重症监护病房心率和血压预测扩散概率模型。

A transformer-based diffusion probabilistic model for heart rate and blood pressure forecasting in Intensive Care Unit.

作者信息

Chang Ping, Li Huayu, Quan Stuart F, Lu Shuyang, Wung Shu-Fen, Roveda Janet, Li Ao

机构信息

Department of Electrical & Computer Engineering, The University of Arizona, Tucson, AZ, USA.

Division of Sleep and Circadian Disorders, Departments of Medicine and Neurology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA; Asthma and Airway Disease Research Center, College of Medicine, The University of Arizona, Tucson, AZ, USA.

出版信息

Comput Methods Programs Biomed. 2024 Apr;246:108060. doi: 10.1016/j.cmpb.2024.108060. Epub 2024 Feb 8.

Abstract

BACKGROUND AND OBJECTIVE

Vital sign monitoring in the Intensive Care Unit (ICU) is crucial for enabling prompt interventions for patients. This underscores the need for an accurate predictive system. Therefore, this study proposes a novel deep learning approach for forecasting Heart Rate (HR), Systolic Blood Pressure (SBP), and Diastolic Blood Pressure (DBP) in the ICU.

METHODS

We extracted 24,886 ICU stays from the MIMIC-III database which contains data from over 46 thousand patients, to train and test the model. The model proposed in this study, Transformer-based Diffusion Probabilistic Model for Sparse Time Series Forecasting (TDSTF), merges Transformer and diffusion models to forecast vital signs. The TDSTF model showed state-of-the-art performance in predicting vital signs in the ICU, outperforming other models' ability to predict distributions of vital signs and being more computationally efficient. The code is available at https://github.com/PingChang818/TDSTF.

RESULTS

The results of the study showed that TDSTF achieved a Standardized Average Continuous Ranked Probability Score (SACRPS) of 0.4438 and a Mean Squared Error (MSE) of 0.4168, an improvement of 18.9% and 34.3% over the best baseline model, respectively. The inference speed of TDSTF is more than 17 times faster than the best baseline model.

CONCLUSION

TDSTF is an effective and efficient solution for forecasting vital signs in the ICU, and it shows a significant improvement compared to other models in the field.

摘要

背景与目的

重症监护病房(ICU)中的生命体征监测对于及时对患者进行干预至关重要。这凸显了对准确预测系统的需求。因此,本研究提出了一种用于预测ICU中心率(HR)、收缩压(SBP)和舒张压(DBP)的新型深度学习方法。

方法

我们从MIMIC-III数据库中提取了24,886例ICU住院病例(该数据库包含来自46,000多名患者的数据)来训练和测试模型。本研究提出的模型,即基于Transformer的稀疏时间序列预测扩散概率模型(TDSTF),融合了Transformer和扩散模型来预测生命体征。TDSTF模型在预测ICU中的生命体征方面表现出了领先的性能,在预测生命体征分布方面优于其他模型,并且计算效率更高。代码可在https://github.com/PingChang818/TDSTF获取。

结果

研究结果表明,TDSTF的标准化平均连续排序概率得分(SACRPS)为0.4438,均方误差(MSE)为0.4168,分别比最佳基线模型提高了18.9%和34.3%。TDSTF的推理速度比最佳基线模型快17倍以上。

结论

TDSTF是一种有效且高效的预测ICU中生命体征的解决方案,与该领域的其他模型相比有显著改进。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/027f/10940190/eae52763e36f/nihms-1965753-f0001.jpg

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本文引用的文献

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Ensemble Conformalized Quantile Regression for Probabilistic Time Series Forecasting.用于概率时间序列预测的集成共形分位数回归
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Nat Methods. 2018 Apr;15(4):233-234. doi: 10.1038/nmeth.4642. Epub 2018 Apr 3.
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