University of Central Oklahoma, Department of Mathematics and Statistics, Edmond, Oklahoma.
University of Central Oklahoma, Department of Mathematics and Statistics, Edmond, Oklahoma.
Biophys J. 2024 Mar 5;123(5):610-621. doi: 10.1016/j.bpj.2024.02.002. Epub 2024 Feb 15.
We modify a three-dimensional multiscale model of fibrinolysis to study the effect of plasmin-mediated degradation of fibrin on tissue plasminogen activator (tPA) diffusion and fibrinolysis. We propose that tPA is released from a fibrin fiber by simple kinetic unbinding, as well as by "forced unbinding," which occurs when plasmin degrades fibrin to which tPA is bound. We show that, if tPA is bound to a small-enough piece of fibrin that it can diffuse into the clot, then plasmin can increase the effective diffusion of tPA. If tPA is bound to larger fibrin degradation products (FDPs) that can only diffuse along the clot, then plasmin can decrease the effective diffusion of tPA. We find that lysis rates are fastest when tPA is bound to fibrin that can diffuse into the clot, and slowest when tPA is bound to FDPs that can only diffuse along the clot. Laboratory experiments confirm that FDPs can diffuse into a clot, and they support the model hypothesis that forced unbinding of tPA results in a mix of FDPs, such that tPA bound to FDPs can diffuse both into and along the clot. Regardless of how tPA is released from a fiber, a tPA mutant with a smaller dissociation constant results in slower lysis (because tPA binds strongly to fibrin), and a tPA mutant with a larger dissociation constant results in faster lysis.
我们修改了一个三维纤维蛋白溶解的多尺度模型,以研究纤溶酶介导的纤维蛋白降解对组织型纤溶酶原激活物(tPA)扩散和纤维蛋白溶解的影响。我们提出 tPA 通过简单的动力学结合释放,以及通过“强制结合释放”释放,当纤溶酶降解与 tPA 结合的纤维蛋白时,就会发生“强制结合释放”。我们表明,如果 tPA 结合在足够小的纤维蛋白片段上,它可以扩散到血栓中,那么纤溶酶可以增加 tPA 的有效扩散。如果 tPA 结合在较大的纤维蛋白降解产物(FDPs)上,只能沿着血栓扩散,那么纤溶酶可以降低 tPA 的有效扩散。我们发现,当 tPA 结合在可以扩散到血栓中的纤维蛋白上时,溶解速率最快,而当 tPA 结合在只能沿着血栓扩散的 FDPs 上时,溶解速率最慢。实验室实验证实 FDPs 可以扩散到血栓中,并且支持模型假设,即 tPA 的强制结合释放会导致 FDPs 的混合,从而使与 FDPs 结合的 tPA 可以扩散到血栓中并沿着血栓扩散。无论 tPA 如何从纤维上释放,解离常数较小的 tPA 突变体导致较慢的溶解(因为 tPA 与纤维蛋白结合紧密),而解离常数较大的 tPA 突变体导致较快的溶解。