从人皮肤分离出的、能够在辛基酚聚乙氧基化物上生长的OT2菌株的基因组序列草图
Draft genome sequence of sp. OT2 isolated from human skin and capable of growing on -octylphenol polyethoxylate.
作者信息
Son Haelim, Huang Shir-Ly, Lee Kyoung
机构信息
Department of Bio Health Science, Changwon National University, Changwon, South Korea.
Institute of Microbiology and Immunology, National Yang Ming Chiao Tung University, Taipei, Taiwan.
出版信息
Microbiol Resour Announc. 2024 Mar 12;13(3):e0119323. doi: 10.1128/mra.01193-23. Epub 2024 Feb 22.
Abstract
Here, we present the draft whole-genome sequence of sp. OT2, isolated from human skin on a minimal medium containing -octylphenol ethoxylate (Triton X-100). This genomic information contributes to understanding the niche adaptation on human skin and its catabolism of Triton X-100 in this strain.
摘要
在此，我们展示了从含有辛基酚乙氧基化物（曲拉通X-100）的基本培养基上的人类皮肤中分离出的sp. OT2菌株的全基因组序列草图。这些基因组信息有助于理解该菌株在人类皮肤上的生态位适应性及其对曲拉通X-100的分解代谢。
相似文献
1
Draft genome sequence of sp. OT2 isolated from human skin and capable of growing on -octylphenol polyethoxylate.从人皮肤分离出的、能够在辛基酚聚乙氧基化物上生长的OT2菌株的基因组序列草图
Microbiol Resour Announc. 2024 Mar 12;13(3):e0119323. doi: 10.1128/mra.01193-23. Epub 2024 Feb 22.
2
Draft Genome Sequence of sp. Strain OT2-17, a Triclosan-Degrading Rhizobacterium.三氯生降解根际细菌sp.菌株OT2-17的基因组序列草图
Microbiol Resour Announc. 2020 Apr 16;9(16):e01596-19. doi: 10.1128/MRA.01596-19.
3
Isolation and characterization of sp. TXBc10 capable of high-efficiency degradation of octylphenol polyethoxylate from tannery wastewater.从制革废水中分离鉴定高效降解辛基酚聚氧乙烯醚的 sp. TXBc10。
Environ Technol. 2020 Dec;41(28):3722-3731. doi: 10.1080/09593330.2019.1619842. Epub 2019 Jun 4.
4
Methylobacterium planium sp. nov., isolated from a lichen sample.粘帚霉属甲基杆菌新种，分离自地衣样本。
Arch Microbiol. 2020 Sep;202(7):1709-1715. doi: 10.1007/s00203-020-01881-4. Epub 2020 Apr 18.
5
Draft Genome Sequence of a Novel Methylobacterium brachiatum Strain Isolated from Human Skin.从人类皮肤分离出的新型臂形甲基杆菌菌株的基因组序列草图
Microbiol Resour Announc. 2020 Dec 10;9(50):e01093-20. doi: 10.1128/MRA.01093-20.
6
Draft Genome Sequence of the Psychrotolerant Bacterium sp. Strain BTF04, Isolated from Freshwater in Antarctica.从南极洲淡水分离出的耐冷细菌嗜冷栖热菌属菌株BTF04的基因组序列草图
Microbiol Resour Announc. 2020 May 21;9(21):e00171-20. doi: 10.1128/MRA.00171-20.
7
sp. nov., isolated from biological soil crusts.sp. nov.，从生物土壤结皮中分离得到。
Int J Syst Evol Microbiol. 2020 Mar;70(3):2089-2095. doi: 10.1099/ijsem.0.004020.
8
Growth of Pseudomonas sp. TX1 on a wide range of octylphenol polyethoxylate concentrations and the formation of dicarboxylated metabolites.铜绿假单胞菌 TX1 在广泛的辛基酚聚氧乙烯醚浓度下的生长及其二羧酸代谢产物的形成。
Bioresour Technol. 2010 Apr;101(8):2853-9. doi: 10.1016/j.biortech.2009.11.029. Epub 2009 Dec 30.
9
Draft Genome Sequence of Methylobacterium sp. ME121, Isolated from Soil as a Mixed Single Colony with Kaistia sp. 32K.甲基杆菌属ME121菌株的基因组草图序列，该菌株从土壤中分离得到，为与凯氏菌属32K菌株混合的单菌落。
Genome Announc. 2015 Sep 3;3(5):e01005-15. doi: 10.1128/genomeA.01005-15.
10
Draft genome sequence of sp. 37f isolated from forest soil.从森林土壤中分离出的37f菌株的基因组序列草图。
Microbiol Resour Announc. 2024 Jun 11;13(6):e0032424. doi: 10.1128/mra.00324-24. Epub 2024 May 20.
引用本文的文献
1
Analysis of the Genomes and Adaptive Traits of sp. nov., a Human Skin Isolate, and the Type Strains and .对一种人类皮肤分离株sp. nov.以及模式菌株和的基因组与适应性特征的分析。
Microorganisms. 2025 Jan 6;13(1):94. doi: 10.3390/microorganisms13010094.
本文引用的文献
1
2,5-Diketo-D-Gluconate Hyperproducing SJF2-1 with Reporting Multiple Genes Encoding the Membrane-Associated Flavoprotein-Cytochrome c Complexed Dehydrogenases.超产2,5-二酮-D-葡萄糖酸的SJF2-1，其报告了多个编码膜相关黄素蛋白-细胞色素c复合脱氢酶的基因。
Microorganisms. 2022 Oct 27;10(11):2130. doi: 10.3390/microorganisms10112130.
2
Aged related human skin microbiome and mycobiome in Korean women.韩国女性与年龄相关的皮肤微生物组和真菌组。
Sci Rep. 2022 Feb 11;12(1):2351. doi: 10.1038/s41598-022-06189-5.
3
Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes.关于将基因组数据用于原核生物分类学的拟议最低标准。
Int J Syst Evol Microbiol. 2018 Jan;68(1):461-466. doi: 10.1099/ijsem.0.002516.
4
from the human skin microbiota: Species-level diversity and hypotheses.来自人类皮肤微生物群：物种水平的多样性及假说
One Health. 2016 Mar 4;2:33-41. doi: 10.1016/j.onehlt.2016.02.002. eCollection 2016 Dec.
5
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.单轮循环器：从短读长和长读长测序数据中解析细菌基因组组装结果
PLoS Comput Biol. 2017 Jun 8;13(6):e1005595. doi: 10.1371/journal.pcbi.1005595. eCollection 2017 Jun.
6
NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
7
The aerobic pseudomonads: a taxonomic study.需氧假单胞菌属：一项分类学研究。
J Gen Microbiol. 1966 May;43(2):159-271. doi: 10.1099/00221287-43-2-159.
Zotero 插件