Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States.
Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States.
Inorg Chem. 2024 Mar 18;63(11):4997-5011. doi: 10.1021/acs.inorgchem.3c04421. Epub 2024 Mar 1.
We study active-site models of nonheme iron hydroxylases and their vanadium-based mimics using density functional theory to determine if vanadyl is a faithful structural mimic. We identify crucial structural and energetic differences between ferryl and vanadyl isomers owing to the differences in their ground electronic states, i.e., high spin (HS) for Fe and low spin (LS) for V. For the succinate cofactor bound to the ferryl intermediate, we predict facile interconversion between monodentate and bidentate coordination isomers for ferryl species but difficult rearrangement for vanadyl mimics. We study isomerization of the oxo intermediate between axial and equatorial positions and find the ferryl potential energy surface to be characterized by a large barrier of ca. 10 kcal/mol that is completely absent for the vanadyl mimic. This analysis reveals even starker contrasts between Fe and V in hydroxylases than those observed for this metal substitution in nonheme halogenases. Analysis of the relative bond strengths of coordinating carboxylate ligands for Fe and V reveals that all of the ligands show stronger binding to V than Fe owing to the LS ground state of V in contrast to the HS ground state of Fe, highlighting the limitations of vanadyl mimics of native nonheme iron hydroxylases.
我们使用密度泛函理论研究非血红素铁羟化酶及其基于钒的模拟物的活性位点模型,以确定钒酰是否是一种忠实的结构模拟物。我们确定了由于其基态电子态(即 Fe 的高自旋 (HS) 和 V 的低自旋 (LS))的差异,铁氧和钒酰异构体之间存在关键的结构和能量差异。对于与铁氧中间物结合的琥珀酸辅因子,我们预测铁氧物种的单齿和双齿配位异构体之间易于互变,但钒酰模拟物不易重排。我们研究了氧中间物在轴向和赤道位置之间的异构化,发现铁氧的势能面具有约 10 kcal/mol 的大势垒,而对于钒酰模拟物则完全不存在。这种分析揭示了羟化酶中 Fe 和 V 之间的对比甚至比非血红素卤化酶中观察到的金属取代更为明显。对 Fe 和 V 配位羧酸盐配体相对键强度的分析表明,由于 V 的 LS 基态,所有配体与 V 的结合都比 Fe 强,与 Fe 的 HS 基态相反,这突出了钒酰对天然非血红素铁羟化酶的模拟物的局限性。