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人和禽类分离株中抗真菌耐药性的基因组流行病学:一项基于同一健康视角的试点研究

Genomic epidemiology of antifungal resistance in human and avian isolates of : a pilot study from the One Health perspective.

作者信息

Domán Marianna, Kaszab Eszter, Laczkó Levente, Bali Krisztina, Makrai László, Kovács Renátó, Majoros László, Bányai Krisztián

机构信息

HUN-REN Veterinary Medical Research Institute, Budapest, Hungary.

National Laboratory for Infectious Animal Diseases, Antimicrobial Resistance, Veterinary Public Health and Food Chain Safety, Budapest, Hungary.

出版信息

Front Vet Sci. 2024 Feb 16;11:1345877. doi: 10.3389/fvets.2024.1345877. eCollection 2024.

DOI:10.3389/fvets.2024.1345877
PMID:38435368
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10904516/
Abstract

Stress-induced genomic changes in contribute to the adaptation of this species to various environmental conditions. Variations of the genome composition of animal-origin strains are largely unexplored and drug resistance or other selective pressures driving the evolution of these yeasts remained an intriguing question. Comparative genome analysis was carried out to uncover chromosomal aneuploidies and regions with loss of heterozygosity (LOH), two mechanisms that manage genome plasticity. We detected aneuploidy only in human isolates. Bird-derived isolates showed LOH in genes commonly associated with antifungal drug resistance similar to human isolates. Our study suggests that environmental fungicide usage might exert selective pressure on infecting animals, thus contributing to the spread of potentially resistant strains between different hosts.

摘要

应激诱导的基因组变化有助于该物种适应各种环境条件。动物源菌株基因组组成的变异在很大程度上尚未得到探索,驱动这些酵母进化的耐药性或其他选择压力仍然是一个有趣的问题。进行了比较基因组分析以揭示染色体非整倍性和杂合性缺失(LOH)区域,这是两种控制基因组可塑性的机制。我们仅在人类分离株中检测到非整倍性。鸟类来源的分离株在与抗真菌药物耐药性相关的常见基因中显示出与人类分离株相似的杂合性缺失。我们的研究表明,环境中杀菌剂的使用可能会对感染动物的[物种名称未给出]施加选择压力,从而导致潜在耐药菌株在不同宿主之间传播。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af01/10904516/6034b2b4da8d/fvets-11-1345877-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af01/10904516/ccd991e700c7/fvets-11-1345877-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af01/10904516/6034b2b4da8d/fvets-11-1345877-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af01/10904516/ccd991e700c7/fvets-11-1345877-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af01/10904516/6034b2b4da8d/fvets-11-1345877-g002.jpg

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本文引用的文献

1
Tetraploidy accelerates adaptation under drug selection in a fungal pathogen.四倍体在真菌病原体的药物选择下加速适应性。
Front Fungal Biol. 2022 Nov 16;3:984377. doi: 10.3389/ffunb.2022.984377. eCollection 2022.
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A One Health approach to overcoming fungal disease and antifungal resistance.从“大健康”角度克服真菌病和抗真菌药物耐药性
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Antifungal Drug Concentration Impacts the Spectrum of Adaptive Mutations in Candida albicans.抗真菌药物浓度会影响白念珠菌适应性突变的谱。
Mol Biol Evol. 2023 Jan 4;40(1). doi: 10.1093/molbev/msad009.
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Acquisition of cross-azole tolerance and aneuploidy in Candida albicans strains evolved to posaconazole.白念珠菌对泊沙康唑产生交叉唑类耐药性和非整倍体的进化
G3 (Bethesda). 2022 Aug 25;12(9). doi: 10.1093/g3journal/jkac156.
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Promising Anti-Biofilm Agents and Phagocytes Enhancers for the Treatment of Biofilm-Associated Infections.具有前景的抗生物膜剂和吞噬细胞增强剂用于治疗生物膜相关感染。
Front Cell Infect Microbiol. 2022 Jul 1;12:807218. doi: 10.3389/fcimb.2022.807218. eCollection 2022.
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An Integrated, Tentative Remote-Sensing Approach Based on NDVI Entropy to Model Canine Distemper Virus in Wildlife and to Prompt Science-Based Management Policies.一种基于归一化植被指数(NDVI)熵的综合、初步遥感方法,用于模拟野生动物中的犬瘟热病毒并推动基于科学的管理政策。
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Collateral consequences of agricultural fungicides on pathogenic yeasts: A One Health perspective to tackle azole resistance.农业杀菌剂对病原性酵母菌的附带后果:解决唑类耐药性的一种大健康视角。
Mycoses. 2022 Mar;65(3):303-311. doi: 10.1111/myc.13404. Epub 2021 Dec 3.
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Recombination Events Shape the Genomic Evolution of Infectious Bronchitis Virus in Europe.重组事件塑造了传染性支气管炎病毒在欧洲的基因组进化。
Viruses. 2021 Mar 24;13(4):535. doi: 10.3390/v13040535.
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HTSlib: C library for reading/writing high-throughput sequencing data.HTSlib:用于读取/写入高通量测序数据的 C 库。
Gigascience. 2021 Feb 16;10(2). doi: 10.1093/gigascience/giab007.
10
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Mycopathologia. 2021 May;186(2):237-244. doi: 10.1007/s11046-021-00527-3. Epub 2021 Jan 29.