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下气嘉单胞菌属,新属,新种,一种产琥珀酸细菌,从拟杆菌目海洋螺旋菌科的厌氧消化罐中分离得到。

Xiashengella succiniciproducens gen. nov., sp. nov., a succinate-producing bacterium isolated from an anaerobic digestion tank in the family Marinilabiliaceae of the order Bacteroidales.

机构信息

State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

State Key Laboratory of Microbial Technology, Shandong University, Qingdao, 266000, China.

出版信息

Arch Microbiol. 2024 Mar 5;206(4):141. doi: 10.1007/s00203-024-03909-5.

Abstract

A strictly anaerobic, motile bacterium, designated as strain Ai-910, was isolated from the sludge of an anaerobic digestion tank in China. Cells were Gram-stain-negative rods. Optimal growth was observed at 38 °C (growth range 25-42 °C), pH 8.5 (growth range 5.5-10.5), and under a NaCl concentration of 0.06% (w/v) (range 0-2.0%). Major cellular fatty acids were iso-C and anteiso-C. The respiratory quinone was MK-7. Using xylose as the growth substrate, succinate was produced as the fermentation product. Phylogenetic analysis based on the 16 S rRNA gene sequences indicated that strain Ai-910 formed a distinct phylogenetic lineage that reflects a new genus in the family Marinilabiliaceae, sharing high similarities to Alkaliflexus imshenetskii Z-7010 (92.78%), Alkalitalea saponilacus SC/BZ-SP2 (92.51%), and Geofilum rubicundum JAM-BA0501 (92.36%). Genomic similarity (average nucleotide identity and digital DNA-DNA hybridization) values between strain Ai-910 and its phylogenetic neighbors were below 65.27 and 16.90%, respectively, indicating that strain Ai-910 represented a novel species. The average amino acid identity between strain Ai-910 and other related members of the family Marinilabiliaceae were below 69.41%, supporting that strain Ai-910T was a member of a new genus within the family Marinilabiliaceae. Phylogenetic, genomic, and phenotypic analysis revealed that strain Ai-910 was distinguished from other phylogenetic relatives within the family Marinilabiliaceae. The genome size was 3.10 Mbp, and the DNA G + C content of the isolate was 42.8 mol%. Collectively, differences of the phenotypic and phylogenetic features of strain Ai-910 from its close relatives suggest that strain Ai-910 represented a novel species in a new genus of the family Marinilabiliaceae, for which the name Xiashengella succiniciproducens gen. nov., sp. nov. was proposed. The type strain of Xiashengella succiniciproducens is Ai-910 (= CGMCC 1.17893 = KCTC 25,304).

摘要

严格厌氧、运动的细菌,被命名为 Ai-910 菌株,从中国的一个厌氧消化罐的污泥中分离出来。细胞是革兰氏阴性杆菌。最佳生长温度为 38°C(生长范围 25-42°C),pH 值为 8.5(生长范围 5.5-10.5),在 0.06%(w/v)的 NaCl 浓度下(范围 0-2.0%)。主要细胞脂肪酸是异-C 和 anteiso-C。呼吸醌是 MK-7。以木糖为生长基质,发酵产物为琥珀酸。基于 16S rRNA 基因序列的系统发育分析表明,菌株 Ai-910 形成了一个独特的进化谱系,反映了 Marinilabiliaceae 科的一个新属,与 Alkaliflexus imshenetskii Z-7010(92.78%)、Alkalitalea saponilacus SC/BZ-SP2(92.51%)和 Geofilum rubicundum JAM-BA0501(92.36%)具有很高的相似性。菌株 Ai-910 与其系统发育上的近缘种之间的基因组相似性(平均核苷酸同一性和数字 DNA-DNA 杂交)值分别低于 65.27%和 16.90%,表明菌株 Ai-910 代表了一个新的种。菌株 Ai-910 与 Marinilabiliaceae 科其他相关成员的平均氨基酸同一性低于 69.41%,支持菌株 Ai-910T 是 Marinilabiliaceae 科一个新属的成员。系统发育、基因组和表型分析表明,菌株 Ai-910 与 Marinilabiliaceae 科的其他系统发育相关种不同。基因组大小为 3.10 Mbp,菌株的 DNA G+C 含量为 42.8 mol%。总的来说,菌株 Ai-910 与近亲的表型和系统发育特征的差异表明,菌株 Ai-910 代表了 Marinilabiliaceae 科一个新属的一个新种,建议将其命名为 Xiashengella succiniciproducens gen. nov.,sp. nov.。Xiashengella succiniciproducens 的模式菌株是 Ai-910(=CGMCC 1.17893=KCTC 25,304)。

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