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基于网络药理学和分子对接技术探索猪胶原蛋白中的降血糖肽

Exploration of hypoglycemic peptides from porcine collagen based on network pharmacology and molecular docking.

作者信息

Zhou Fating, Li Di, Hou Yakun, Cong Zhihui, Li Kaifeng, Gu Xin, Xiao Guosheng

机构信息

College of Biology and Food Engineering, Chongqing Three Gorges University, Chongqing, China.

College of Food Science and Technology, Hebei Agricultural University, Baoding, China.

出版信息

PLoS One. 2024 Mar 12;19(3):e0298674. doi: 10.1371/journal.pone.0298674. eCollection 2024.

Abstract

In recent years, the extraction of hypoglycemic peptides from food proteins has gained increasing attention. Neuropeptides, hormone peptides, antimicrobial peptides, immune peptides, antioxidant peptides, hypoglycemic peptides and antihypertensive peptides have become research hotspots. In this study, bioinformatic methods were used to screen and predict the properties of pig collagen-derived hypoglycemic peptides, and their inhibitory effects on α-glucosidase were determined in vitro. Two peptides (RL and NWYR) were found to exhibit good water solubility, adequate ADMET (absorption, distribution, metabolism, elimination, and toxicity) properties, potentially high biological activity, and non-toxic. After synthesizing these peptides, NWYR showed the best inhibitory effect on α-glucosidase with IC50 = 0.200±0.040 mg/mL, and it can regulate a variety of biological processes, play a variety of molecular functions in different cellular components, and play a hypoglycemic role by participating in diabetic cardiomyopathy and IL-17 signaling pathway. Molecular docking results showed that NWYR had the best binding effect with the core target DPP4 (4n8d), with binding energy of -8.8 kcal/mol. NWYR mainly bonded with the target protein through hydrogen bonding, and bound with various amino acid residues such as Asp-729, Gln-731, Leu-765, etc., thus affecting the role of the target in each pathway. It is the best core target for adjuvant treatment of T2DM. In short, NWYR has the potential to reduce type 2 diabetes, providing a basis for further research or food applications as well as improved utilization of pig by-products. However, in subsequent studies, it is necessary to further verify the hypoglycemic ability of porcine collagen active peptide (NWYR), and explore the hypoglycemic mechanism of NWYR from multiple perspectives such as key target genes, protein expression levels and differences in metabolites in animal models of hyperglycemia, which will provide further theoretical support for its improvement in the treatment of T2DM.

摘要

近年来,从食物蛋白质中提取降血糖肽越来越受到关注。神经肽、激素肽、抗菌肽、免疫肽、抗氧化肽、降血糖肽和抗高血压肽已成为研究热点。本研究利用生物信息学方法筛选和预测猪胶原蛋白源降血糖肽的性质,并在体外测定其对α-葡萄糖苷酶的抑制作用。发现两种肽(RL和NWYR)具有良好的水溶性、适当的ADMET(吸收、分布、代谢、排泄和毒性)性质、潜在的高生物活性且无毒。合成这些肽后,NWYR对α-葡萄糖苷酶表现出最佳抑制作用,IC50 = 0.200±0.040 mg/mL,它可以调节多种生物学过程,在不同细胞成分中发挥多种分子功能,并通过参与糖尿病性心肌病和IL-17信号通路发挥降血糖作用。分子对接结果表明,NWYR与核心靶点DPP4(4n8d)的结合效果最佳,结合能为-8.8 kcal/mol。NWYR主要通过氢键与靶蛋白结合,并与Asp-729、Gln-731、Leu-765等多种氨基酸残基结合,从而影响靶标在各途径中的作用。它是辅助治疗2型糖尿病的最佳核心靶点。总之,NWYR具有降低2型糖尿病的潜力,为进一步研究或食品应用以及提高猪副产品利用率提供了依据。然而,在后续研究中,有必要进一步验证猪胶原蛋白活性肽(NWYR)的降血糖能力,并从高血糖动物模型的关键靶基因、蛋白表达水平和代谢产物差异等多个角度探索NWYR的降血糖机制,这将为其在2型糖尿病治疗中的改进提供进一步的理论支持。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6713/10931479/907441fb1b74/pone.0298674.g001.jpg

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