Meroueh Chady, Warasnhe Khaled, Tizhoosh Hamid R, Shah Vijay H, Ibrahim Samar H
Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA.
Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota, USA.
Hepatology. 2024 Mar 22. doi: 10.1097/HEP.0000000000000866.
Steatohepatitis with diverse etiologies is the most common histological manifestation in patients with liver disease. However, there are currently no specific histopathological features pathognomonic for metabolic dysfunction-associated steatotic liver disease, alcohol-associated liver disease, or metabolic dysfunction-associated steatotic liver disease with increased alcohol intake. Digitizing traditional pathology slides has created an emerging field of digital pathology, allowing for easier access, storage, sharing, and analysis of whole-slide images. Artificial intelligence (AI) algorithms have been developed for whole-slide images to enhance the accuracy and speed of the histological interpretation of steatohepatitis and are currently employed in biomarker development. Spatial biology is a novel field that enables investigators to map gene and protein expression within a specific region of interest on liver histological sections, examine disease heterogeneity within tissues, and understand the relationship between molecular changes and distinct tissue morphology. Here, we review the utility of digital pathology (using linear and nonlinear microscopy) augmented with AI analysis to improve the accuracy of histological interpretation. We will also discuss the spatial omics landscape with special emphasis on the strengths and limitations of established spatial transcriptomics and proteomics technologies and their application in steatohepatitis. We then highlight the power of multimodal integration of digital pathology augmented by machine learning (ML)algorithms with spatial biology. The review concludes with a discussion of the current gaps in knowledge, the limitations and premises of these tools and technologies, and the areas of future research.
不同病因的脂肪性肝炎是肝病患者最常见的组织学表现。然而,目前尚无代谢功能障碍相关脂肪性肝病、酒精性肝病或酒精摄入量增加的代谢功能障碍相关脂肪性肝病的特异性组织病理学特征。将传统病理切片数字化开创了数字病理学这一新兴领域,使全切片图像的获取、存储、共享和分析更加便捷。已针对全切片图像开发了人工智能(AI)算法,以提高脂肪性肝炎组织学解读的准确性和速度,目前该算法已用于生物标志物开发。空间生物学是一个新领域,使研究人员能够在肝脏组织切片上特定感兴趣区域绘制基因和蛋白质表达图谱,检查组织内的疾病异质性,并了解分子变化与不同组织形态之间的关系。在此,我们综述了结合AI分析的数字病理学(使用线性和非线性显微镜)在提高组织学解读准确性方面的效用。我们还将讨论空间组学概况,特别强调已确立的空间转录组学和蛋白质组学技术的优势和局限性及其在脂肪性肝炎中的应用。然后,我们强调通过机器学习(ML)算法增强的数字病理学与空间生物学多模态整合的作用。本文最后讨论了当前知识空白、这些工具和技术的局限性及前提条件,以及未来研究领域。