Chadoulos Christos, Tsaopoulos Dimitrios, Symeonidis Andreas, Moustakidis Serafeim, Theocharis John
Department of Electrical & Computer Engineering, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece.
Institute for Bio-Economy and Agri-Technology, Centre for Research and Technology-Hellas, 38333 Volos, Greece.
Bioengineering (Basel). 2024 Mar 14;11(3):278. doi: 10.3390/bioengineering11030278.
In this paper, we propose a dense multi-scale adaptive graph convolutional network () method for automatic segmentation of the knee joint cartilage from MR images. Under the multi-atlas setting, the suggested approach exhibits several novelties, as described in the following. First, our models integrate both local-level and global-level learning simultaneously. The local learning task aggregates spatial contextual information from aligned spatial neighborhoods of nodes, at multiple scales, while global learning explores pairwise affinities between nodes, located globally at different positions in the image. We propose two different structures of building models, whereby the local and global convolutional units are combined by following an alternating or a sequential manner. Secondly, based on the previous models, we develop the network, by utilizing a densely connected architecture with residual skip connections. This is a deeper structure, expanded over different block layers, thus being capable of providing more expressive node feature representations. Third, all units pertaining to the overall network are equipped with their individual adaptive graph learning mechanism, which allows the graph structures to be automatically learned during training. The proposed cartilage segmentation method is evaluated on the entire publicly available Osteoarthritis Initiative () cohort. To this end, we have devised a thorough experimental setup, with the goal of investigating the effect of several factors of our approach on the classification rates. Furthermore, we present exhaustive comparative results, considering traditional existing methods, six deep learning segmentation methods, and seven graph-based convolution methods, including the currently most representative models from this field. The obtained results demonstrate that the outperforms all competing methods across all evaluation measures, providing DSC=95.71% and DSC=94.02% for the segmentation of femoral and tibial cartilage, respectively.
在本文中,我们提出了一种用于从磁共振图像中自动分割膝关节软骨的密集多尺度自适应图卷积网络()方法。在多图谱设置下,所提出的方法具有几个新颖之处,如下所述。首先,我们的模型同时集成了局部层面和全局层面的学习。局部学习任务在多个尺度上聚合来自节点对齐空间邻域的空间上下文信息,而全局学习探索位于图像中不同全局位置的节点之间的成对亲和力。我们提出了两种不同的构建模型结构,其中局部和全局卷积单元以交替或顺序方式组合。其次,基于先前的模型,我们通过利用具有残差跳跃连接的密集连接架构来开发网络。这是一种更深层次的结构,在不同的块层上扩展,因此能够提供更具表现力的节点特征表示。第三,与整个网络相关的所有单元都配备了各自的自适应图学习机制,这使得图结构能够在训练期间自动学习。所提出的软骨分割方法在整个公开可用的骨关节炎倡议()队列上进行了评估。为此,我们设计了一个全面的实验设置,目的是研究我们方法的几个因素对分类率的影响。此外,我们给出了详尽的比较结果,考虑了传统的现有方法、六种深度学习分割方法以及七种基于图的卷积方法,包括该领域目前最具代表性的模型。获得的结果表明,在所有评估指标上均优于所有竞争方法,股骨和胫骨软骨分割的DSC分别为95.71%和94.02%。