• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

探索骨肉瘤中铁死亡和铜死亡的基因生物标志物及靶向药物:一种生物信息学方法。

Exploring gene biomarkers and targeted drugs for ferroptosis and cuproptosis in osteosarcoma: A bioinformatic approach.

作者信息

Ji Yingnan, Liu Lv, Liu Yu, Ma Yudong, Ji Zhenhua, Wu Xiaodan, Zhu Qi

机构信息

Central Hospital Affiliated to Shenyang Medical College, Shenyang, China.

Benxi Central Hospital, Benxi, China.

出版信息

Environ Toxicol. 2025 Jun;40(6):891-901. doi: 10.1002/tox.24250. Epub 2024 Mar 28.

DOI:10.1002/tox.24250
PMID:38546286
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12069744/
Abstract

Osteosarcoma predominantly affects adolescents and young adults and is characterized as a malignant bone tumor. In recent decades, substantial advancements have been achieved in both diagnosing and treating osteosarcoma. Resulting in enhanced survival rates. Despite these advancements, the intricate relationship between ferroptosis and cuproptosis genes in osteosarcoma remains inadequately understood. Leveraging TARGET and GEO datasets, we conducted Cox regression analysis to select prognostic genes from a cohort of 71 candidates. Subsequently, a novel prognostic model was engineered using the LASSO algorithm. Kaplan-Meier analysis demonstrated that patients stratified as low risk had a substantially better prognosis compared with their high-risk counterparts. The model's validity was corroborated by the area under the receiver operating characteristic (ROC) curve. Additionally, we ascertained independent prognostic indicators, including clinical presentation, metastatic status, and risk scores, and crafted a clinical scoring system via nomograms. The tumor immune microenvironment was appraised through ESTIMATE, CIBERSORT, and single-sample gene set enrichment analysis. Gene expression within the model was authenticated through PCR validation. The prognostic model, refined by Cox regression and the LASSO algorithm, comprised two risk genes. Kaplan-Meier curves confirmed a significantly improved prognosis for the low-risk group in contrast to those identified as high-risk. For the training set, the ROC area under the curve (AUC) values stood at 0.636, 0.695, and 0.729 for the 1-, 3-, and 5-year checkpoints, respectively. Although validation set AUCs were 0.738, 0.668, and 0.596, respectively. Immune microenvironmental analysis indicated potential immune deficiencies in high-risk patients. Additionally, sensitivity to three small molecule drugs was investigated in the high-risk cohort, informing potential immunotherapeutic strategies for osteosarcoma. PCR analysis showed increased mRNA levels of the genes FDX1 and SQLE in osteosarcoma tissues. This study elucidates the interaction of ferroptosis and cuproptosis genes in osteosarcoma and paves the way for more targeted immunotherapy.

摘要

骨肉瘤主要影响青少年和年轻成年人,其特征为恶性骨肿瘤。近几十年来,骨肉瘤的诊断和治疗都取得了重大进展,生存率因此得以提高。尽管有这些进展,但骨肉瘤中细胞铁死亡和铜死亡基因之间的复杂关系仍未得到充分了解。利用TARGET和GEO数据集,我们进行了Cox回归分析,从71个候选基因队列中选择预后基因。随后,使用LASSO算法构建了一个新的预后模型。Kaplan-Meier分析表明,与高危患者相比,低风险分层患者的预后明显更好。该模型的有效性通过受试者操作特征(ROC)曲线下面积得到证实。此外,我们确定了独立的预后指标,包括临床表现、转移状态和风险评分,并通过列线图构建了一个临床评分系统。通过ESTIMATE、CIBERSORT和单样本基因集富集分析评估肿瘤免疫微环境。通过PCR验证对模型中的基因表达进行了验证。经Cox回归和LASSO算法优化的预后模型包含两个风险基因。Kaplan-Meier曲线证实,与高危组相比,低风险组的预后有显著改善。对于训练集,1年、3年和5年检查点的ROC曲线下面积(AUC)值分别为0.636、0.695和0.729。尽管验证集的AUC值分别为0.738、0.668和0.596。免疫微环境分析表明高危患者存在潜在的免疫缺陷。此外,在高危队列中研究了对三种小分子药物的敏感性,为骨肉瘤潜在的免疫治疗策略提供了依据。PCR分析显示骨肉瘤组织中FDX1和SQLE基因的mRNA水平升高。本研究阐明了骨肉瘤中细胞铁死亡和铜死亡基因的相互作用,为更有针对性的免疫治疗铺平了道路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16d0/12069744/41e26fdf1386/TOX-40-891-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16d0/12069744/fbfdfadf54d1/TOX-40-891-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16d0/12069744/c956b76efe69/TOX-40-891-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16d0/12069744/b28f428c2441/TOX-40-891-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16d0/12069744/26678976ebcd/TOX-40-891-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16d0/12069744/225791cc644a/TOX-40-891-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16d0/12069744/500031f99e6b/TOX-40-891-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16d0/12069744/b722c74c150e/TOX-40-891-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16d0/12069744/48fcf70ad386/TOX-40-891-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16d0/12069744/41e26fdf1386/TOX-40-891-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16d0/12069744/fbfdfadf54d1/TOX-40-891-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16d0/12069744/c956b76efe69/TOX-40-891-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16d0/12069744/b28f428c2441/TOX-40-891-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16d0/12069744/26678976ebcd/TOX-40-891-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16d0/12069744/225791cc644a/TOX-40-891-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16d0/12069744/500031f99e6b/TOX-40-891-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16d0/12069744/b722c74c150e/TOX-40-891-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16d0/12069744/48fcf70ad386/TOX-40-891-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16d0/12069744/41e26fdf1386/TOX-40-891-g004.jpg

相似文献

1
Exploring gene biomarkers and targeted drugs for ferroptosis and cuproptosis in osteosarcoma: A bioinformatic approach.探索骨肉瘤中铁死亡和铜死亡的基因生物标志物及靶向药物:一种生物信息学方法。
Environ Toxicol. 2025 Jun;40(6):891-901. doi: 10.1002/tox.24250. Epub 2024 Mar 28.
2
Ferroptosis-related gene signature associates with immunity and predicts prognosis accurately in patients with osteosarcoma.铁死亡相关基因特征与免疫相关,可准确预测骨肉瘤患者的预后。
Cancer Sci. 2021 Nov;112(11):4785-4798. doi: 10.1111/cas.15131. Epub 2021 Sep 21.
3
Develop a Novel Signature to Predict the Survival and Affect the Immune Microenvironment of Osteosarcoma Patients: Anoikis-Related Genes.开发一种新型标志物预测骨肉瘤患者的生存并影响其免疫微环境:与失巢凋亡相关的基因。
J Immunol Res. 2024 Mar 27;2024:6595252. doi: 10.1155/2024/6595252. eCollection 2024.
4
Prognostic model of osteosarcoma based on telomere-related genes and analysis of immune characteristics.基于端粒相关基因的骨肉瘤预后模型及免疫特征分析
Int Immunopharmacol. 2025 Apr 4;151:114198. doi: 10.1016/j.intimp.2025.114198. Epub 2025 Feb 20.
5
Construction and validation of a novel cuproptosis-mitochondrion prognostic model related with tumor immunity in osteosarcoma.构建并验证骨肉瘤中与肿瘤免疫相关的新型铜死亡-线粒体预后模型。
PLoS One. 2023 Jul 5;18(7):e0288180. doi: 10.1371/journal.pone.0288180. eCollection 2023.
6
Ferroptosis-related lncRNAs guiding osteosarcoma prognosis and immune microenvironment.铁死亡相关 lncRNAs 指导骨肉瘤预后和免疫微环境。
J Orthop Surg Res. 2023 Oct 19;18(1):787. doi: 10.1186/s13018-023-04286-3.
7
A prognostic glycolysis-related gene signature in osteosarcoma: implications for metabolic programming, immune microenvironment, and drug response.骨肉瘤中一种与预后相关的糖酵解基因特征:对代谢编程、免疫微环境和药物反应的影响。
PeerJ. 2025 Apr 29;13:e19369. doi: 10.7717/peerj.19369. eCollection 2025.
8
Ferroptosis and cuproptosis prognostic signature for prediction of prognosis, immunotherapy and drug sensitivity in hepatocellular carcinoma: development and validation based on TCGA and ICGC databases.用于预测肝细胞癌预后、免疫治疗及药物敏感性的铁死亡和铜死亡预后特征:基于TCGA和ICGC数据库的构建与验证
Transl Cancer Res. 2023 Jan 30;12(1):46-64. doi: 10.21037/tcr-22-2203. Epub 2022 Dec 19.
9
The tumor immune microenvironment and immune-related signature predict the chemotherapy response in patients with osteosarcoma.肿瘤免疫微环境和免疫相关特征可预测骨肉瘤患者的化疗反应。
BMC Cancer. 2021 May 21;21(1):581. doi: 10.1186/s12885-021-08328-z.
10
Importance of CD8 Tex cell-associated gene signatures in the prognosis and immunology of osteosarcoma.CD8 T 细胞相关基因特征在骨肉瘤预后和免疫学中的重要性。
Sci Rep. 2024 Apr 29;14(1):9769. doi: 10.1038/s41598-024-60539-z.

引用本文的文献

1
Ubiquitination in lipid metabolism reprogramming: implications for pediatric solid tumors.脂质代谢重编程中的泛素化:对小儿实体瘤的影响
Front Immunol. 2025 Apr 30;16:1554311. doi: 10.3389/fimmu.2025.1554311. eCollection 2025.
2
Cross-talk between cuproptosis and ferroptosis to identify immune landscape in cervical cancer for mRNA vaccines development.铜死亡与铁死亡之间的相互作用以确定宫颈癌的免疫格局用于mRNA疫苗开发
Eur J Med Res. 2024 Dec 19;29(1):602. doi: 10.1186/s40001-024-02191-x.

本文引用的文献

1
Baicalin induces ferroptosis in osteosarcomas through a novel Nrf2/xCT/GPX4 regulatory axis.黄芩通过 novel Nrf2/xCT/GPX4 调节轴诱导骨肉瘤发生铁死亡。
Phytomedicine. 2023 Jul 25;116:154881. doi: 10.1016/j.phymed.2023.154881. Epub 2023 May 13.
2
Comprehensive analysis of cuproptosis in immune response and prognosis of osteosarcoma.骨肉瘤免疫反应和预后中铜死亡的综合分析
Front Pharmacol. 2022 Oct 3;13:992431. doi: 10.3389/fphar.2022.992431. eCollection 2022.
3
Identification of a novel cuproptosis-related gene signature and integrative analyses in patients with lower-grade gliomas.
鉴定新型铜死亡相关基因特征并对低级别脑胶质瘤患者进行综合分析。
Front Immunol. 2022 Aug 15;13:933973. doi: 10.3389/fimmu.2022.933973. eCollection 2022.
4
A novel signature to guide osteosarcoma prognosis and immune microenvironment: Cuproptosis-related lncRNA.一种指导骨肉瘤预后和免疫微环境的新型标志物:铜死亡相关 lncRNA。
Front Immunol. 2022 Jul 29;13:919231. doi: 10.3389/fimmu.2022.919231. eCollection 2022.
5
Comprehensive Analysis of Cuproptosis-Related Genes in Immune Infiltration and Prognosis in Melanoma.黑色素瘤中铜死亡相关基因在免疫浸润和预后中的综合分析
Front Pharmacol. 2022 Jun 28;13:930041. doi: 10.3389/fphar.2022.930041. eCollection 2022.
6
Cuproptosis: a copper-triggered modality of mitochondrial cell death.铜死亡:一种由铜引发的线粒体细胞死亡方式。
Cell Res. 2022 May;32(5):417-418. doi: 10.1038/s41422-022-00653-7.
7
Copper induces cell death by targeting lipoylated TCA cycle proteins.铜通过靶向脂酰化 TCA 循环蛋白诱导细胞死亡。
Science. 2022 Mar 18;375(6586):1254-1261. doi: 10.1126/science.abf0529. Epub 2022 Mar 17.
8
N6-Methyladenosine-Related LncRNAs Are Potential Remodeling Indicators in the Tumor Microenvironment and Prognostic Markers in Osteosarcoma.N6-甲基腺苷相关长非编码 RNA 是肿瘤微环境中潜在的重构指标和骨肉瘤的预后标志物。
Front Immunol. 2022 Jan 12;12:806189. doi: 10.3389/fimmu.2021.806189. eCollection 2021.
9
A Novel Pyroptosis-Related Signature for Predicting Prognosis and Indicating Immune Microenvironment Features in Osteosarcoma.一种用于预测骨肉瘤预后和指示免疫微环境特征的新型焦亡相关特征
Front Genet. 2021 Nov 26;12:780780. doi: 10.3389/fgene.2021.780780. eCollection 2021.
10
Ferroptosis-related gene signature associates with immunity and predicts prognosis accurately in patients with osteosarcoma.铁死亡相关基因特征与免疫相关,可准确预测骨肉瘤患者的预后。
Cancer Sci. 2021 Nov;112(11):4785-4798. doi: 10.1111/cas.15131. Epub 2021 Sep 21.