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“代谢负担”解析:大肠杆菌中(过)表达(异源)蛋白所诱导的应激症状及其相关反应。

"Metabolic burden" explained: stress symptoms and its related responses induced by (over)expression of (heterologous) proteins in Escherichia coli.

机构信息

Department of Biotechnology, Centre for Synthetic Biology, Coupure Links 653, Gent, 9000, Belgium.

出版信息

Microb Cell Fact. 2024 Mar 30;23(1):96. doi: 10.1186/s12934-024-02370-9.

Abstract

BACKGROUND

Engineering bacterial strains to redirect the metabolism towards the production of a specific product has enabled the development of industrial biotechnology. However, rewiring the metabolism can have severe implications for a microorganism, rendering cells with stress symptoms such as a decreased growth rate, impaired protein synthesis, genetic instability and an aberrant cell size. On an industrial scale, this is reflected in processes that are not economically viable.

MAIN TEXT

In literature, most stress symptoms are attributed to "metabolic burden", however the actual triggers and stress mechanisms involved are poorly understood. Therefore, in this literature review, we aimed to get a better insight in how metabolic engineering affects Escherichia coli and link the observed stress symptoms to its cause. Understanding the possible implications that chosen engineering strategies have, will help to guide the reader towards optimising the envisioned process more efficiently.

CONCLUSION

This review addresses the gap in literature and discusses the triggers and effects of stress mechanisms that can be activated when (over)expressing (heterologous) proteins in Escherichia coli. It uncovers that the activation of the different stress mechanisms is complex and that many are interconnected. The reader is shown that care has to be taken when (over)expressing (heterologous) proteins as the cell's metabolism is tightly regulated.

摘要

背景

通过对细菌菌株进行工程改造,使其代谢途径转向特定产物的生产,从而推动了工业生物技术的发展。然而,对代谢途径进行重新布线可能会对微生物产生严重影响,导致细胞出现应激症状,如生长速度下降、蛋白质合成受损、遗传不稳定性和细胞大小异常。在工业规模上,这反映在经济上不可行的工艺过程中。

正文

在文献中,大多数应激症状都归因于“代谢负担”,然而,实际的触发因素和涉及的应激机制还了解甚少。因此,在本文献综述中,我们旨在更深入地了解代谢工程如何影响大肠杆菌,并将观察到的应激症状与其原因联系起来。了解所选工程策略可能产生的影响,将有助于指导读者更有效地优化预期工艺。

结论

本综述填补了文献中的空白,并讨论了在大肠杆菌中过表达(异源)蛋白时可能激活的应激机制的触发因素和影响。它揭示了不同应激机制的激活是复杂的,并且许多机制是相互关联的。读者应该注意,在过表达(异源)蛋白时要小心,因为细胞的代谢受到严格的调控。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f856/10981312/be04021e644c/12934_2024_2370_Fig1_HTML.jpg

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