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一项五十个基因座的系统发育分析为(,)的系统发育提供了深入见解。

A fifty-locus phylogenetic analysis provides deep insights into the phylogeny of (, ).

作者信息

Ding X X, Xu X, Cui Y Y, Kost G, Wang P M, Yang Z L

机构信息

CAS Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan, China.

Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming 650201, Yunnan, China.

出版信息

Persoonia. 2023 Jun;50:1-26. doi: 10.3767/persoonia.2023.50.01. Epub 2023 Jan 24.

Abstract

As an ectomycorrhizal fungal genus that contains matsutake and other edible mushrooms, has great economic and ecological significance. However, the phylogenetic relationships within the genus remain unsettled. To clarify the infrageneric relationships of , including the identification of monophyletic subgenera and sections, three phylogenetic analyses were conducted employing single-locus (ITS), five-locus (ITS/ /mtSSU) and 50-locus (45 single-copy orthologous genes plus the aforementioned ones) DNA nucleotide sequences. Our data indicated that ITS sequences could serve the species delimitation of in most cases and monophyletic groups recognition in some cases, and the five-locus dataset could resolve a section-level phylogeny of this genus, while the 50-locus dataset could clarify the delimitation of subgenera and settle the relationships among sections within this genus. A fifty-locus dataset was firstly employed to construct a robust phylogeny of . Based on this, a new infrageneric arrangement for the genus , with four subgenera, of which two are in accordance with the previous subgenera and , and eleven sections, is suggested. Subgenus , occupying the basal position, only harbors sect. , while the subg. comprises sects. and located at the sub-basal position with good support. Subgenus is newly erected here and consists of sect. , sect. and two as yet unnamed phylogenetic lineages. Besides an unnamed section-level lineage, subg. consists of sects. , , , , and , of which the two latter are newly proposed. The previously defined subg. is clustered within subg. and is a synonym of the latter. , and their allies, which used to be allocated in sect. (or genus ), are relocated to sect. since they form a strongly supported monophyletic group and share rusty or black spots on lamellae with other species in this section. Taxonomic descriptions of the new infrageneric taxa and a key to subgenera and sections of the genus are presented. : Ding XX, Xu X, Cui YY, et al. 2023. A fifty-locus phylogenetic analysis provides deep insights into the phylogeny of Tricholoma (Tricholomataceae, Agaricales). Persoonia 50: 1-26. https://doi.org/10.3767/persoonia.2023.50.01.

摘要

作为一个包含松口蘑和其他可食用蘑菇的外生菌根真菌属,具有重大的经济和生态意义。然而,该属内的系统发育关系仍未确定。为了阐明该属的属下关系,包括确定单系亚属和组,我们利用单基因座(ITS)、五基因座(ITS/ /mtSSU)和50基因座(45个单拷贝直系同源基因加上上述基因)的DNA核苷酸序列进行了三次系统发育分析。我们的数据表明,ITS序列在大多数情况下可用于该属的物种界定,在某些情况下可用于识别单系类群,五基因座数据集可解析该属的组级系统发育,而50基因座数据集可阐明亚属的界定并解决该属内组间的关系。首次使用50基因座数据集构建了该属的稳健系统发育树。基于此,建议对该属进行新的属下分类安排,包括四个亚属,其中两个与之前的亚属 和 一致,以及十一个组。占据基部位置的亚属 仅包含组 ,而亚属 包括位于亚基部位置且支持良好的组 和 。亚属 在此处新建立,由组 、组 和两个尚未命名的系统发育谱系组成。除了一个未命名的组级谱系外,亚属 由组 、组 、组 、组 、组 和 组成,其中后两个是新提出的。先前定义的亚属 聚集在亚属 内,是后者的同义词。 、 及其近缘种,以前被归入组 (或属 ),现被重新归入组 ,因为它们形成了一个得到强烈支持的单系类群,并且与该组中的其他物种在菌褶上有锈色或黑色斑点。给出了新的属下分类单元的分类描述以及该属亚属和组的检索表。:丁XX,徐X,崔YY等。2023。基于50基因座的系统发育分析为口蘑属(口蘑科,伞菌目)的系统发育提供了深入见解。《真菌学报》50:1 - 26。https://doi.org/10.3767/persoonia.2023.50.01

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f94/10983840/1888df6ea691/per-2024-50-1-F1.jpg

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