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使用代谢组学评估了在南极半岛西北部和南设得兰群岛(南极洲海域)夏季采集的雪样中的真菌多样性。

Fungal diversity present in snow sampled in summer in the north-west Antarctic Peninsula and the South Shetland Islands, Maritime Antarctica, assessed using metabarcoding.

机构信息

Departamento de Microbiologia, Universidade Federal de Minas Gerais, Minas Gerais, Brazil.

Laboratório de Microbiologia, Universidade Federal do Tocantins, Palmas, Brazil.

出版信息

Extremophiles. 2024 Apr 4;28(2):23. doi: 10.1007/s00792-024-01338-2.

Abstract

We assessed the fungal diversity present in snow sampled during summer in the north-west Antarctic Peninsula and the South Shetland Islands, maritime Antarctica using a metabarcoding approach. A total of 586,693 fungal DNA reads were obtained and assigned to 203 amplicon sequence variants (ASVs). The dominant phylum was Ascomycota, followed by Basidiomycota, Mortierellomycota, Chytridiomycota and Mucoromycota. Penicillium sp., Pseudogymnoascus pannorum, Coniochaeta sp., Aspergillus sp., Antarctomyces sp., Phenoliferia sp., Cryolevonia sp., Camptobasidiaceae sp., Rhodotorula mucilaginosa and Bannozyma yamatoana were assessed as abundant taxa. The snow fungal diversity indices were high but varied across the different locations sampled. Of the fungal ASVs detected, only 28 were present all sampling locations. The 116 fungal genera detected in the snow were dominated by saprotrophic taxa, followed by symbiotrophic and pathotrophic. Our data indicate that, despite the low temperature and oligotrophic conditions, snow can host a richer mycobiome than previously reported through traditional culturing studies. The snow mycobiome includes a complex diversity dominated by cosmopolitan, cold-adapted, psychrophilic and endemic taxa. While saprophytes dominate this community, a range of other functional groups are present.

摘要

我们使用宏条形码方法评估了在南极半岛西北部和南设得兰群岛(南极洲海域)夏季采集的雪样中存在的真菌多样性。共获得了 586693 条真菌 DNA 读取序列,并将其分配到 203 个扩增子序列变异体 (ASV)。优势门是子囊菌门,其次是担子菌门、毛霉门、壶菌门和毛霉门。Penicillium sp.、Pseudogymnoascus pannorum、Coniochaeta sp.、Aspergillus sp.、Antarctomyces sp.、Phenoliferia sp.、Cryolevonia sp.、Camptobasidiaceae sp.、Rhodotorula mucilaginosa 和 Bannozyma yamatoana 被评估为丰富的类群。雪样中的真菌多样性指数较高,但在不同采样地点有所不同。在所检测到的真菌 ASV 中,只有 28 种存在于所有采样地点。在雪样中检测到的 116 个真菌属主要由腐生类群主导,其次是共生和致病类群。我们的数据表明,尽管温度低且营养贫瘠,但与传统的培养研究相比,雪可以容纳比以前报道的更丰富的真菌生物群。雪样中的真菌生物群包括一个以世界性、耐寒、嗜冷和特有类群为主的复杂多样性。虽然腐生菌是该群落的优势类群,但也存在其他一系列功能类群。

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