Department of Molecular Machines and Signaling, Max Planck Institute of Biochemistry, Martinsried, Germany.
Aligning Science Across Parkinson's (ASAP) Collaborative Research Network, Chevy Chase, MD, USA.
Nat Struct Mol Biol. 2024 Aug;31(8):1176-1188. doi: 10.1038/s41594-024-01268-9. Epub 2024 Apr 10.
Dedicated assembly factors orchestrate the stepwise production of many molecular machines, including the 28-subunit proteasome core particle (CP) that mediates protein degradation. Here we report cryo-electron microscopy reconstructions of seven recombinant human subcomplexes that visualize all five chaperones and the three active site propeptides across a wide swath of the assembly pathway. Comparison of these chaperone-bound intermediates and a matching mature CP reveals molecular mechanisms determining the order of successive subunit additions, as well as how proteasome subcomplexes and assembly factors structurally adapt upon progressive subunit incorporation to stabilize intermediates, facilitate the formation of subsequent intermediates and ultimately rearrange to coordinate proteolytic activation with gated access to active sites. This work establishes a methodologic approach for structural analysis of multiprotein complex assembly intermediates, illuminates specific functions of assembly factors and reveals conceptual principles underlying human proteasome biogenesis, thus providing an explanation for many previous biochemical and genetic observations.
专用组装因子协调许多分子机器的逐步组装,包括介导蛋白质降解的 28 个亚基蛋白酶体核心颗粒(CP)。在这里,我们报告了七个重组人亚基复合物的冷冻电镜重建,这些重建可视化了组装途径中所有五个伴侣蛋白和三个活性位点前肽。将这些伴侣蛋白结合的中间产物与匹配的成熟 CP 进行比较,揭示了决定连续亚基添加顺序的分子机制,以及蛋白酶体亚基复合物和组装因子如何在逐步亚基掺入时进行结构适应,以稳定中间产物、促进后续中间产物的形成,最终重新排列以协调蛋白水解激活和对活性位点的门控进入。这项工作为多蛋白复合物组装中间产物的结构分析建立了一种方法,阐明了组装因子的特定功能,并揭示了人类蛋白酶体生物发生的基本概念原则,从而为许多以前的生化和遗传观察结果提供了解释。