Committee on Genetics, Genomics, and Systems Biology, The University of Chicago, Chicago, IL, USA.
Department of Biochemistry and Molecular Biology, The University of Chicago, Chicago, IL, USA.
Nat Commun. 2024 Apr 11;15(1):3127. doi: 10.1038/s41467-024-47355-9.
Cells must sense and respond to sudden maladaptive environmental changes-stresses-to survive and thrive. Across eukaryotes, stresses such as heat shock trigger conserved responses: growth arrest, a specific transcriptional response, and biomolecular condensation of protein and mRNA into structures known as stress granules under severe stress. The composition, formation mechanism, adaptive significance, and even evolutionary conservation of these condensed structures remain enigmatic. Here we provide a remarkable view into stress-triggered condensation, its evolutionary conservation and tuning, and its integration into other well-studied aspects of the stress response. Using three morphologically near-identical budding yeast species adapted to different thermal environments and diverged by up to 100 million years, we show that proteome-scale biomolecular condensation is tuned to species-specific thermal niches, closely tracking corresponding growth and transcriptional responses. In each species, poly(A)-binding protein-a core marker of stress granules-condenses in isolation at species-specific temperatures, with conserved molecular features and conformational changes modulating condensation. From the ecological to the molecular scale, our results reveal previously unappreciated levels of evolutionary selection in the eukaryotic stress response, while establishing a rich, tractable system for further inquiry.
细胞必须感知和应对突然的适应不良的环境变化——压力——才能生存和繁荣。在真核生物中,热休克等压力会引发保守的反应:生长停滞、特定的转录反应,以及在严重压力下蛋白质和 mRNA 生物分子凝聚成称为应激颗粒的结构。这些凝聚结构的组成、形成机制、适应性意义,甚至进化保守性仍然是个谜。在这里,我们提供了一个引人注目的视角,展示了应激触发的凝聚、其进化保守性和调节,以及它与应激反应的其他研究良好的方面的整合。使用三种形态上几乎相同的适应不同热环境的 budding 酵母物种,它们的分化时间长达 1 亿年,我们表明,蛋白质组规模的生物分子凝聚被调节到特定物种的热生态位,与相应的生长和转录反应密切相关。在每个物种中,聚(A)结合蛋白——应激颗粒的核心标记物——在特定温度下独立凝聚,具有保守的分子特征和构象变化调节凝聚。从生态学到分子水平,我们的结果揭示了真核生物应激反应中以前未被认识到的进化选择水平,同时建立了一个丰富、易于研究的系统进一步探究。