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脑 3D MRI 分类中的联合变压器架构:在阿尔茨海默病分类中的应用。

Joint transformer architecture in brain 3D MRI classification: its application in Alzheimer's disease classification.

机构信息

Department of Computer Engineering, Erzurum Technical University, Erzurum, Turkey.

Division of Clinical Informatics, Department of Medicine, Louisiana State University Health Sciences Center - Shreveport, Shreveport, LA, 71103-4228, USA.

出版信息

Sci Rep. 2024 Apr 18;14(1):8996. doi: 10.1038/s41598-024-59578-3.

DOI:10.1038/s41598-024-59578-3
PMID:38637671
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11026447/
Abstract

Alzheimer's disease (AD), a neurodegenerative disease that mostly affects the elderly, slowly impairs memory, cognition, and daily tasks. AD has long been one of the most debilitating chronic neurological disorders, affecting mostly people over 65. In this study, we investigated the use of Vision Transformer (ViT) for Magnetic Resonance Image processing in the context of AD diagnosis. ViT was utilized to extract features from MRIs, map them to a feature sequence, perform sequence modeling to maintain interdependencies, and classify features using a time series transformer. The proposed model was evaluated using ADNI T1-weighted MRIs for binary and multiclass classification. Two data collections, Complete 1Yr 1.5T and Complete 3Yr 3T, from the ADNI database were used for training and testing. A random split approach was used, allocating 60% for training and 20% for testing and validation, resulting in sample sizes of (211, 70, 70) and (1378, 458, 458), respectively. The performance of our proposed model was compared to various deep learning models, including CNN with BiL-STM and ViT with Bi-LSTM. The suggested technique diagnoses AD with high accuracy (99.048% for binary and 99.014% for multiclass classification), precision, recall, and F-score. Our proposed method offers researchers an approach to more efficient early clinical diagnosis and interventions.

摘要

阿尔茨海默病(AD)是一种主要影响老年人的神经退行性疾病,它会缓慢损害记忆、认知和日常任务。AD 一直是最具致残性的慢性神经疾病之一,主要影响 65 岁以上的人群。在这项研究中,我们研究了使用 Vision Transformer(ViT)进行磁共振成像处理在 AD 诊断中的应用。ViT 用于从 MRI 中提取特征,将它们映射到特征序列,进行序列建模以保持相互依赖关系,并使用时间序列转换器对特征进行分类。所提出的模型使用 ADNI 的 T1 加权 MRI 进行二进制和多类分类进行评估。从 ADNI 数据库中使用了两个数据集,即 Complete 1Yr 1.5T 和 Complete 3Yr 3T,用于训练和测试。采用随机分割方法,将 60%用于训练,20%用于测试和验证,分别得到样本大小为(211、70、70)和(1378、458、458)。我们提出的模型的性能与各种深度学习模型进行了比较,包括具有 BiL-STM 的 CNN 和具有 Bi-LSTM 的 ViT。该技术对 AD 的诊断具有很高的准确性(二进制分类为 99.048%,多类分类为 99.014%)、精确率、召回率和 F 分数。我们的方法为研究人员提供了一种更有效的早期临床诊断和干预方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/176c/11026447/4c52475359a6/41598_2024_59578_Fig7_HTML.jpg
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