Suppr超能文献

马达加斯加叶尾壁虎卫星基因组的细胞遗传学分析

Cytogenetic Analysis of Satellitome of Madagascar Leaf-Tailed Geckos.

作者信息

Yurchenko Alona, Pšenička Tomáš, Mora Pablo, Ortega Juan Alberto Marchal, Baca Antonio Sánchez, Rovatsos Michail

机构信息

Department of Ecology, Faculty of Science, Charles University, 128 44 Prague, Czech Republic.

Department of Experimental Biology, Faculty of Experimental Sciences, University of Jaén, Campus Las Lagunillas s/n, E-23071 Jaen, Spain.

出版信息

Genes (Basel). 2024 Mar 28;15(4):429. doi: 10.3390/genes15040429.

Abstract

Satellite DNA (satDNA) consists of sequences of DNA that form tandem repetitions across the genome, and it is notorious for its diversity and fast evolutionary rate. Despite its importance, satDNA has been only sporadically studied in reptile lineages. Here, we sequenced genomic DNA and PCR-amplified microdissected W chromosomes on the Illumina platform in order to characterize the monomers of satDNA from the Henkel's leaf-tailed gecko and to compare their topology by in situ hybridization in the karyotypes of the closely related Günther's flat-tail gecko and gold dust day gecko . We identified seventeen different satDNAs; twelve of them seem to accumulate in centromeres, telomeres and/or the W chromosome. Notably, centromeric and telomeric regions seem to share similar types of satDNAs, and we found two that seem to accumulate at both edges of all chromosomes in all three species. We speculate that the long-term stability of all-acrocentric karyotypes in geckos might be explained from the presence of specific satDNAs at the centromeric regions that are strong meiotic drivers, a hypothesis that should be further tested.

摘要

卫星DNA(satDNA)由在基因组中形成串联重复序列的DNA序列组成,其多样性和快速进化速率使其声名狼藉。尽管其很重要,但在爬行动物谱系中,对卫星DNA的研究一直很零散。在此,我们在Illumina平台上对基因组DNA进行测序,并对显微切割的W染色体进行PCR扩增,以便鉴定亨氏叶尾壁虎卫星DNA的单体,并通过原位杂交在亲缘关系密切的冈氏扁尾壁虎和金粉日守宫的核型中比较它们的拓扑结构。我们鉴定出17种不同的卫星DNA;其中12种似乎在着丝粒、端粒和/或W染色体中积累。值得注意的是,着丝粒和端粒区域似乎共享相似类型的卫星DNA,并且我们发现有两种卫星DNA似乎在所有三个物种的所有染色体的两端都有积累。我们推测,壁虎全近端着丝粒核型的长期稳定性可能是由于着丝粒区域存在特定的卫星DNA,这些卫星DNA是强大的减数分裂驱动因子,这一假设有待进一步验证。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87f8/11049218/b3a8b9d70c5a/genes-15-00429-g002.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验