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LNDb v4:从医学报告中提取肺结节注释。

LNDb v4: pulmonary nodule annotation from medical reports.

机构信息

Institute for Systems and Computer Engineering, Technology and Science (INESC TEC), Porto, Portugal.

Faculty of Engineering of the University of Porto (FEUP), Porto, Portugal.

出版信息

Sci Data. 2024 May 17;11(1):512. doi: 10.1038/s41597-024-03345-6.

Abstract

Given the high prevalence of lung cancer, an accurate diagnosis is crucial. In the diagnosis process, radiologists play an important role by examining numerous radiology exams to identify different types of nodules. To aid the clinicians' analytical efforts, computer-aided diagnosis can streamline the process of identifying pulmonary nodules. For this purpose, medical reports can serve as valuable sources for automatically retrieving image annotations. Our study focused on converting medical reports into nodule annotations, matching textual information with manually annotated data from the Lung Nodule Database (LNDb)-a comprehensive repository of lung scans and nodule annotations. As a result of this study, we have released a tabular data file containing information from 292 medical reports in the LNDb, along with files detailing nodule characteristics and corresponding matches to the manually annotated data. The objective is to enable further research studies in lung cancer by bridging the gap between existing reports and additional manual annotations that may be collected, thereby fostering discussions about the advantages and disadvantages between these two data types.

摘要

鉴于肺癌的高发病率,准确的诊断至关重要。在诊断过程中,放射科医生通过检查大量的放射学检查来识别不同类型的结节,从而发挥重要作用。为了帮助临床医生进行分析,计算机辅助诊断可以简化识别肺结节的过程。为此,医疗报告可以作为自动检索图像注释的有价值的资源。我们的研究重点是将医疗报告转换为结节注释,将文本信息与来自 Lung Nodule Database(LNDb)的手动注释数据相匹配,LNDb 是一个包含肺扫描和结节注释的综合数据库。通过这项研究,我们发布了一个包含 LNDb 中 292 份医疗报告信息的表格数据文件,以及详细说明结节特征和与手动注释数据对应匹配的文件。其目的是通过弥合现有报告和可能收集的其他手动注释之间的差距,促进关于这两种数据类型优缺点的讨论,从而促进肺癌的进一步研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/09a9/11101445/e4047ab3a440/41597_2024_3345_Fig1_HTML.jpg

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