Liu Chi, Li Chaonan, Jiang Yanqiong, Zeng Raymond J, Yao Minjie, Li Xiangzhen
Engineering Research Center of Soil Remediation of Fujian Province University, College of Resources and Environment Fujian Agriculture and Forestry University Fuzhou China.
Key Laboratory of Environmental and Applied Microbiology, CAS, Environmental Microbiology Key Laboratory of Sichuan Province, Chengdu Institute of Biology Chinese Academy of Sciences Chengdu China.
Imeta. 2023 Jan 10;2(1):e71. doi: 10.1002/imt2.71. eCollection 2023 Feb.
The article provides a pipeline for comparing microbial co-occurrence networks based on the R microeco package and meconetcomp package. It has high flexibility and expansibility and can help users efficiently compare networks built from different groups of samples or different construction approaches.
本文提供了一个基于R语言的microeco包和meconetcomp包来比较微生物共现网络的流程。它具有高度的灵活性和可扩展性,能够帮助用户高效地比较由不同样本组或不同构建方法构建的网络。