• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

浦项光源II的固定靶粉红光束系列同步辐射晶体学数据。

Data of fixed-target pink-beam serial synchrotron crystallography at the Pohang Light Source II.

作者信息

Kim Yongsam, Nam Ki Hyun

机构信息

Pohang Accelerator Laboratory, Pohang 37673, Republic of Korea.

College of General Education, Kookmin University, Seoul 02707, Republic of Korea.

出版信息

Data Brief. 2024 Jun 10;55:110604. doi: 10.1016/j.dib.2024.110604. eCollection 2024 Aug.

DOI:10.1016/j.dib.2024.110604
PMID:39006347
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11239454/
Abstract

Pink-beam serial synchrotron crystallography (SSX) is beneficial in terms of X-ray flux and overcoming partial reflection compared with SSX using a monochromatic beam. The fixed-target (FT) scanning method can minimize the physical damage on the crystal sample when delivering the crystals to the X-ray interaction point. Additionally, general researchers can easily access the experiment since no specialized sample transfer technology is needed. The fixed-target pink-beam SSX at the 1C beamline at the Pohang Light Source II (PLS-II) was previously demonstrated using a newly developed magnetic-based sample holder. The room-temperature structure of glucose isomerase and lysozyme were determined using FT pink-beam SSX. Meanwhile, the SSX dataset for glucose isomerase and lysozyme images containing the high X-ray background and multi-crystal hits. These data can be tentatively used to develop an indexing algorithm and practice processing the SX data. This study used detailed information on the diffraction data of fixed-target pink-beam SSX at PLS-II to access the raw data and process the information.

摘要

与使用单色光束的串行同步加速器晶体学(SSX)相比,粉红光束串行同步加速器晶体学在X射线通量和克服部分反射方面具有优势。固定靶(FT)扫描方法在将晶体传送到X射线相互作用点时,可以将对晶体样品的物理损伤降至最低。此外,由于不需要专门的样品转移技术,一般研究人员可以轻松进行该实验。浦项光源II(PLS-II)的1C光束线处的固定靶粉红光束SSX此前已通过新开发的磁性样品架得到验证。利用FT粉红光束SSX确定了葡萄糖异构酶和溶菌酶的室温结构。同时,葡萄糖异构酶和溶菌酶图像的SSX数据集包含高X射线背景和多晶体命中情况。这些数据可暂用于开发索引算法和实践处理SX数据。本研究利用PLS-II处固定靶粉红光束SSX衍射数据的详细信息来获取原始数据并处理该信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73f9/11239454/c24aa74863c2/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73f9/11239454/8883e4a8c023/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73f9/11239454/7345b40271a9/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73f9/11239454/e94b9cae861d/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73f9/11239454/dbfcdb42223f/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73f9/11239454/c24aa74863c2/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73f9/11239454/8883e4a8c023/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73f9/11239454/7345b40271a9/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73f9/11239454/e94b9cae861d/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73f9/11239454/dbfcdb42223f/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73f9/11239454/c24aa74863c2/gr5.jpg

相似文献

1
Data of fixed-target pink-beam serial synchrotron crystallography at the Pohang Light Source II.浦项光源II的固定靶粉红光束系列同步辐射晶体学数据。
Data Brief. 2024 Jun 10;55:110604. doi: 10.1016/j.dib.2024.110604. eCollection 2024 Aug.
2
Data of pink-beam serial synchrotron crystallography at the Pohang Light Source II.浦项光源II的粉色束流系列同步辐射晶体学数据。
Data Brief. 2023 Nov 17;52:109811. doi: 10.1016/j.dib.2023.109811. eCollection 2024 Feb.
3
Data of serial synchrotron crystallography of xylanase GH11 from .来自……的木聚糖酶GH11的系列同步辐射晶体学数据。 (你提供的原文不完整,缺少具体来源等信息,以上是根据现有内容尽量准确翻译的结果 )
Data Brief. 2024 Jan 12;52:110055. doi: 10.1016/j.dib.2024.110055. eCollection 2024 Feb.
4
High-viscosity injector-based pink-beam serial crystallography of microcrystals at a synchrotron radiation source.基于高粘度注射器的同步辐射源微晶粉色束连续晶体学
IUCrJ. 2019 Apr 5;6(Pt 3):412-425. doi: 10.1107/S205225251900263X. eCollection 2019 May 1.
5
pinkIndexer - a universal indexer for pink-beam X-ray and electron diffraction snapshots.粉色索引器 - 一种用于粉色光束X射线和电子衍射快照的通用索引器。
Acta Crystallogr A Found Adv. 2020 Mar 1;76(Pt 2):121-131. doi: 10.1107/S2053273319015559. Epub 2020 Jan 10.
6
1 kHz fixed-target serial crystallography using a multilayer monochromator and an integrating pixel detector.使用多层单色仪和积分像素探测器的1千赫兹固定靶串行晶体学。
IUCrJ. 2019 Aug 17;6(Pt 5):927-937. doi: 10.1107/S205225251900914X. eCollection 2019 Sep 1.
7
A simple goniometer-compatible flow cell for serial synchrotron X-ray crystallography.一种用于连续同步加速器X射线晶体学的简易与测角仪兼容的流动池。
J Appl Crystallogr. 2023 Mar 9;56(Pt 2):449-460. doi: 10.1107/S1600576723001036. eCollection 2023 Apr 1.
8
Room-temperature serial crystallography at synchrotron X-ray sources using slowly flowing free-standing high-viscosity microstreams.利用缓慢流动的独立高粘度微流在同步加速器X射线源处进行室温串行晶体学研究。
Acta Crystallogr D Biol Crystallogr. 2015 Feb;71(Pt 2):387-97. doi: 10.1107/S1399004714026327. Epub 2015 Jan 23.
9
Guide to serial synchrotron crystallography.串行同步加速器晶体学指南。
Curr Res Struct Biol. 2024 Feb 6;7:100131. doi: 10.1016/j.crstbi.2024.100131. eCollection 2024.
10
Polyimide mesh-based sample holder with irregular crystal mounting holes for fixed-target serial crystallography.用于固定靶序列晶体学的具有不规则晶体安装孔的聚酰亚胺网基样品架。
Sci Rep. 2021 Jun 23;11(1):13115. doi: 10.1038/s41598-021-92687-x.

引用本文的文献

1
Novel polymer fixed-target microfluidic platforms with an ultra-thin moisture barrier for serial macromolecular crystallography.用于串行大分子晶体学的具有超薄防潮层的新型聚合物固定靶微流控平台。
bioRxiv. 2025 Jul 18:2025.07.13.663488. doi: 10.1101/2025.07.13.663488.
2
Laue-DIALS: Open-source software for polychromatic x-ray diffraction data.劳厄-DIALS:用于多色X射线衍射数据的开源软件。
Struct Dyn. 2024 Oct 2;11(5):054701. doi: 10.1063/4.0000265. eCollection 2024 Sep.
3
Laue-DIALS: open-source software for polychromatic X-ray diffraction data.

本文引用的文献

1
Data of pink-beam serial synchrotron crystallography at the Pohang Light Source II.浦项光源II的粉色束流系列同步辐射晶体学数据。
Data Brief. 2023 Nov 17;52:109811. doi: 10.1016/j.dib.2023.109811. eCollection 2024 Feb.
2
Hit and Indexing Rate in Serial Crystallography: Incomparable Statistics.串行晶体学中的命中与索引率:不可比的统计数据。
Front Mol Biosci. 2022 Mar 25;9:858815. doi: 10.3389/fmolb.2022.858815. eCollection 2022.
3
Polyimide mesh-based sample holder with irregular crystal mounting holes for fixed-target serial crystallography.
劳厄 - DIALS:用于多色X射线衍射数据的开源软件。
bioRxiv. 2024 Jul 23:2024.07.23.604358. doi: 10.1101/2024.07.23.604358.
4
Guide to serial synchrotron crystallography.串行同步加速器晶体学指南。
Curr Res Struct Biol. 2024 Feb 6;7:100131. doi: 10.1016/j.crstbi.2024.100131. eCollection 2024.
5
Data of pink-beam serial synchrotron crystallography at the Pohang Light Source II.浦项光源II的粉色束流系列同步辐射晶体学数据。
Data Brief. 2023 Nov 17;52:109811. doi: 10.1016/j.dib.2023.109811. eCollection 2024 Feb.
用于固定靶序列晶体学的具有不规则晶体安装孔的聚酰亚胺网基样品架。
Sci Rep. 2021 Jun 23;11(1):13115. doi: 10.1038/s41598-021-92687-x.
4
Crystal structure of the metal-free state of glucose isomerase reveals its minimal open configuration for metal binding.葡萄糖异构酶无金属状态的晶体结构揭示了其用于金属结合的最小开放构象。
Biochem Biophys Res Commun. 2021 Apr 2;547:69-74. doi: 10.1016/j.bbrc.2021.02.026. Epub 2021 Feb 17.
5
XGANDALF - extended gradient descent algorithm for lattice finding.XGANDALF - 用于晶格查找的扩展梯度下降算法。
Acta Crystallogr A Found Adv. 2019 Sep 1;75(Pt 5):694-704. doi: 10.1107/S2053273319010593. Epub 2019 Aug 30.
6
High-viscosity injector-based pink-beam serial crystallography of microcrystals at a synchrotron radiation source.基于高粘度注射器的同步辐射源微晶粉色束连续晶体学
IUCrJ. 2019 Apr 5;6(Pt 3):412-425. doi: 10.1107/S205225251900263X. eCollection 2019 May 1.
7
Nylon mesh-based sample holder for fixed-target serial femtosecond crystallography.基于尼龙网的固定靶连续飞秒晶体学样品支架。
Sci Rep. 2019 May 6;9(1):6971. doi: 10.1038/s41598-019-43485-z.
8
Polyacrylamide injection matrix for serial femtosecond crystallography.用于连续飞秒晶体学的聚丙烯酰胺注射基质。
Sci Rep. 2019 Feb 21;9(1):2525. doi: 10.1038/s41598-019-39020-9.
9
Pink-beam serial crystallography.粉束序列晶体学。
Nat Commun. 2017 Nov 3;8(1):1281. doi: 10.1038/s41467-017-01417-3.
10
Recent developments in .最近在……方面的进展
J Appl Crystallogr. 2016 Mar 29;49(Pt 2):680-689. doi: 10.1107/S1600576716004751. eCollection 2016 Apr 1.