Phylogeography, Genetic Diversity and Population Structure of Sensu Stricto Inferred by Mitochondrial DNA Markers between Southeast of Iran and Pakistan.

BACKGROUND

Current study was designed to provide a better insight into the circulating genotypes, genetic diversity, and population structure of spp. between southeast of Iran and Pakistan

METHODS

From Jun 2020 to Dec 2020, 46 hydatid cysts were taken from human (n: 6), camel (n: 10), goat (n: 10), cattle (n: 10) and sheep (n: 10) in various cities of Sistan and Baluchestan Province of Iran, located at the neighborhood of Pakistan. DNA samples were extracted, amplified, and subjected to sequence analysis of and genes.

RESULTS

The phylogeny inferred by the Maximum Likelihood algorithm indicated that G1 genotype (n: 19), G3 genotype (n: 14) and G6 genotype (n: 13) assigned into their specific clades. The diversity indices showed a moderate (: Hd: 0.485) to high haplotype diversity ( Hd: 0.867) of s.s. (G1/G3) and low nucleotide diversity. The negative value of Tajima's and Fu's Fs test displayed deviation from neutrality indicating a recent population expansion. A parsimonious network of the haplotypes of displayed star-like features in the overall population containing IR9/PAK1/G1, IR2/PAK2/G3 and IR18/G6 as the most common haplotypes. A pairwise fixation index (st) indicated that s.s. populations are genetically moderate differentiated between southeast of Iran and Pakistan. The extension of haplotypes PAK18/G1 (sheep) and PAK26/G1 (cattle) toward Iranian haplogroup revealed that there is dawn of flow due to a transfer of alleles between mentioned populations through transport of livestock or their domestication.

CONCLUSION

The current findings strengthen our knowledge concerning the evolutionary paradigms of in southeastern borders of Iran and is effective in controlling of hydatidosis.