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FCN1在泛癌中的预后价值和免疫特征的多组学评估及其与急性髓系白血病增殖和凋亡的关系

Multi-omics evaluation of the prognostic value and immune signature of FCN1 in pan-cancer and its relationship with proliferation and apoptosis in acute myeloid leukemia.

作者信息

Zhong Fangfang, Song Lijun, Li Hao, Liu Jing, Liu Chunyan, Guo Qulian, Liu Wenjun

机构信息

Department of Pediatrics, Children Hematological Oncology and Birth Defects Laboratory, The Affiliated Hospital of Southwest Medical University, Sichuan Clinical Research Center for Birth Defects, Luzhou, Sichuan, China.

Department of Pediatrics, Hejiang County People's Hospital, Luzhou, Sichuan, China.

出版信息

Front Genet. 2024 Jul 29;15:1425075. doi: 10.3389/fgene.2024.1425075. eCollection 2024.

Abstract

BACKGROUND

The FCN1 gene encodes the ficolin-1 protein, implicated in the pathogenesis of various diseases, though its precise role in tumorigenesis remains elusive. This study aims to elucidate the prognostic significance, immune signature, and treatment response associated with FCN1 across diverse cancer types.

METHODS

Employing multi-omics data, we conducted a comprehensive assessment, encompassing tissue-specific and single-cell-specific expression disparities, pan-cancer expression patterns, epigenetic modifications affecting FCN1 expression, and the immune microenvironment. Our investigation primarily focused on the clinical prognostic attributes, immune profiles, potential molecular mechanisms, and candidate therapeutic agents concerning FCN1 and acute myeloid leukemia (AML). Additionally, experiments were performed to scrutinize the impact of FCN1 knockdown on cell proliferation, apoptosis, and cell cycle dynamics within the AML cell line U937 and NB4.

RESULTS

FCN1 expression exhibits widespread dysregulation across various cancers. Through both univariate and multivariate Cox regression analyses, FCN1 has been identified as an independent prognostic indicator for AML. Immunological investigations elucidate FCN1's involvement in modulating inflammatory responses within the tumor microenvironment and its correlation with treatment efficacy. Remarkably, the deletion of FCN1 influences the proliferation, apoptosis, and cell cycle dynamics of U937 cells and NB4 cells.

CONCLUSION

These findings underscore FCN1 as a promising pan-cancer biomarker indicative of macrophage infiltration, intimately linked with the tumor microenvironment and treatment responsiveness, and pivotal for cellular mechanisms within AML cell lines.

摘要

背景

FCN1基因编码纤维胶凝蛋白-1,其与多种疾病的发病机制有关,但其在肿瘤发生中的具体作用仍不清楚。本研究旨在阐明FCN1在不同癌症类型中的预后意义、免疫特征和治疗反应。

方法

利用多组学数据,我们进行了全面评估,包括组织特异性和单细胞特异性表达差异、泛癌表达模式、影响FCN1表达的表观遗传修饰以及免疫微环境。我们的研究主要集中在FCN1和急性髓系白血病(AML)的临床预后特征、免疫谱、潜在分子机制和候选治疗药物。此外,还进行了实验以研究FCN1敲低对AML细胞系U937和NB4中细胞增殖、凋亡和细胞周期动力学的影响。

结果

FCN1表达在各种癌症中普遍失调。通过单变量和多变量Cox回归分析,FCN1已被确定为AML的独立预后指标。免疫学研究阐明了FCN1参与调节肿瘤微环境中的炎症反应及其与治疗效果的相关性。值得注意的是,FCN1的缺失影响U937细胞和NB4细胞的增殖、凋亡和细胞周期动力学。

结论

这些发现强调FCN1是一种有前景的泛癌生物标志物,可指示巨噬细胞浸润,与肿瘤微环境和治疗反应密切相关,并且对AML细胞系中的细胞机制至关重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/78f4/11320419/4977eb56464b/fgene-15-1425075-g001.jpg

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