Department of Life Sciences, Chalmers University of Technology, SE-412 96 Gothenburg, Sweden.
Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, DK-2800 Kgs. Lyngby, Denmark.
Int J Syst Evol Microbiol. 2024 Sep;74(9). doi: 10.1099/ijsem.0.006514.
Six bacterial strains, Mut1, Mut2, Alt1, Alt2, Alt3, and Alt4, were isolated from soil samples collected in parks in Gothenburg, Sweden, based on their ability to utilize the insoluble polysaccharides α-1,3-glucan (mutan; Mut strains) or the mixed-linkage α-1,3/α-1,6-glucan (alternan; Alt strains). Analysis of 16S rRNA gene sequences identified all strains as members of the genus . The genomes of the strains were sequenced and subsequent phylogenetic analyses identified Mut2 as a strain of and Alt1, Alt2 and Alt4 as strains of while Mut1 and Alt3 were most closely related to the type strains NBRC 101007 and NRRL ISP-5137, respectively. Comprehensive genomic and biochemical characterizations were conducted, highlighting typical features of , such as large genomes (8.0-9.6 Mb) with high G+C content (70.5-72.0%). All six strains also encode a wide repertoire of putative carbohydrate-active enzymes, indicating a capability to utilize various complex polysaccharides as carbon sources such as starch, mutan, and cellulose, which was confirmed experimentally. Based on phylogenetic and phenotypic characterization, our study suggests that strains Mut1 and Alt3 represent novel species in the genus for which the names sp. nov. and sp. nov. are proposed, with strains Mut1 (=DSM 117248=CCUG 77596) and Alt3 (=DSM 117252=CCUG 77600) representing the respective type strains.
从瑞典哥德堡公园采集的土壤样本中分离到 6 株细菌,根据它们利用不溶性多糖 α-1,3-葡聚糖(甘露聚糖;Mut 菌株)或混合链接的 α-1,3/α-1,6-葡聚糖(交替糖;Alt 菌株)的能力。16S rRNA 基因序列分析表明所有菌株均为属的成员。对菌株的基因组进行测序,并进行后续的系统发育分析,确定 Mut2 为 的一个菌株,Alt1、Alt2 和 Alt4 为 的菌株,而 Mut1 和 Alt3 与模式菌株 NBRC 101007 和 NRRL ISP-5137 的亲缘关系最为密切。对这些菌株进行了全面的基因组和生化特征分析,突出了 的典型特征,如大基因组(8.0-9.6 Mb)和高 G+C 含量(70.5-72.0%)。所有 6 株菌均编码广泛的潜在糖基活性酶,表明它们能够利用各种复杂的多糖作为碳源,如淀粉、甘露聚糖和纤维素,这一点通过实验得到了证实。基于系统发育和表型特征,我们的研究表明,菌株 Mut1 和 Alt3 代表了属中的新种,建议分别将它们命名为 sp. nov. 和 sp. nov.,其中菌株 Mut1(=DSM 117248=CCUG 77596)和 Alt3(=DSM 117252=CCUG 77600)为相应的模式菌株。