Gaona-Mendoza América Selene, Massange-Sánchez Julio Armando, Barboza-Corona José Eleazar, Abraham-Juárez María Jazmín, Casados-Vázquez Luz Edith
Posgrado en Biociencias, Universidad de Guanajuato, Campus Irapuato-Salamanca, Carretera Irapuato Silao Km 9, 36500, Irapuato, Guanajuato, Mexico.
División de Ciencias de La Vida, Departamento de Alimentos, Universidad de Guanajuato, Campus Irapuato-Salamanca, Carretera Irapuato Silao Km 9, 36500, Irapuato, Guanajuato, Mexico.
Mol Biotechnol. 2024 Sep 23. doi: 10.1007/s12033-024-01285-5.
Lactococcus lactis is a Gram-positive bacterium used to produce fermented foods and heterologous proteins. Its Nisin-controlled gene expression system stands out for its versatility and safety. However, the lower GC content in its genome may lead to some limitations in protein production. In this study, we explored the importance and effect of codon optimization on fluorescent reporter protein expression in L. lactis. Three non-optimized fluorescent reporter genes (gfp, rfp, and mcherry) were compared to the codon-optimized variant (mcherry-O). Parameters such as Codon Adaptation Index (CAI), Effective Number of Codons (Enc) and Guanine-Cytosine percentage (% GC) were determined to assess their influence on gene expression and protein synthesis. The production of non-optimized fluorescent proteins does not correlate with their gene expression levels, except for the codon-optimized mCherry-O protein, which was detected in the SDS-PAGE gel and the extracted lysate (visually detected). Expression of the mcherry gene was similar to the mcherry-O gene, but protein was only detected with the optimized gene. The gfp gene showed the highest expression levels, but the quantity of protein was undetectable by SDS-PAGE. The rfp gene was revealed to be an optimized gene but not tailored for L. lactis. These findings underscore the necessity of comprehensive codon optimization for foreign genes in L. lactis and reveal intriguing complexities between expression levels, RNA stability and protein synthesis.
乳酸乳球菌是一种革兰氏阳性细菌,用于生产发酵食品和异源蛋白质。其乳链菌肽控制的基因表达系统因其多功能性和安全性而脱颖而出。然而,其基因组中较低的GC含量可能会导致蛋白质生产方面的一些限制。在本研究中,我们探讨了密码子优化对乳酸乳球菌中荧光报告蛋白表达的重要性和影响。将三个未优化的荧光报告基因(gfp、rfp和mcherry)与密码子优化变体(mcherry-O)进行了比较。测定了密码子适应指数(CAI)、有效密码子数(Enc)和鸟嘌呤-胞嘧啶百分比(%GC)等参数,以评估它们对基因表达和蛋白质合成的影响。除了在SDS-PAGE凝胶和提取的裂解物中检测到的密码子优化的mCherry-O蛋白外,未优化的荧光蛋白的产生与其基因表达水平无关。mcherry基因的表达与mcherry-O基因相似,但只有优化后的基因才能检测到蛋白质。gfp基因显示出最高的表达水平,但SDS-PAGE无法检测到蛋白质的量。rfp基因被证明是一个优化的基因,但不是为乳酸乳球菌量身定制的。这些发现强调了对乳酸乳球菌中外源基因进行全面密码子优化的必要性,并揭示了表达水平、RNA稳定性和蛋白质合成之间有趣的复杂性。