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Anoikis-Related Long Non-Coding RNA Signatures to Predict Prognosis and Immune Infiltration of Gastric Cancer.

作者信息

Meng Wen-Jun, Guo Jia-Min, Huang Li, Zhang Yao-Yu, Zhu Yue-Ting, Tang Lian-Sha, Wang Jia-Ling, Li Hong-Shuai, Liu Ji-Yan

机构信息

Department of Biotherapy, Cancer Center, West China Hospital, Sichuan University, Chengdu 610041, China.

Division of Abdominal Tumor Multimodality Treatment, Cancer Center, West China Hospital, Sichuan University, Chengdu 610041, China.

出版信息

Bioengineering (Basel). 2024 Sep 5;11(9):893. doi: 10.3390/bioengineering11090893.


DOI:10.3390/bioengineering11090893
PMID:39329635
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11428253/
Abstract

Anoikis is a distinct type of programmed cell death and a unique mechanism for tumor progress. However, its exact function in gastric cancer (GC) remains unknown. This study aims to investigate the function of anoikis-related lncRNA (ar-lncRNA) in the prognosis of GC and its immunological infiltration. The ar-lncRNAs were derived from RNA sequencing data and associated clinical information obtained from The Cancer Genome Atlas. Pearson correlation analysis, differential screening, LASSO and Cox regression were utilized to identify the typical ar-lncRNAs with prognostic significance, and the corresponding risk model was constructed, respectively. Comprehensive methods were employed to assess the clinical characteristics of the prediction model, ensuring the accuracy of the prediction results. Further analysis was conducted on the relationship between immune microenvironment and risk features, and sensitivity predictions were made about anticancer medicines. A risk model was built according to seven selected ar-lncRNAs. The model was validated and the calibration plots were highly consistent in validating nomogram predictions. Further analyses revealed the great accuracy of the model and its ability to serve as a stand-alone GC prognostic factor. We subsequently disclosed that high-risk groups display significant enrichment in pathways related to tumors and the immune system. Additionally, in tumor immunoassays, notable variations in immune infiltrates and checkpoints were noted between different risk groups. This study proposes, for the first time, that prognostic signatures of ar-lncRNA can be established in GC. These signatures accurately predict the prognosis of GC and offer potential biomarkers, suggesting new avenues for basic research, prognosis prediction and personalized diagnosis and treatment of GC.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6ac0/11428253/77e5f39cbd40/bioengineering-11-00893-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6ac0/11428253/7fffcbac12d6/bioengineering-11-00893-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6ac0/11428253/3356bdfd5d19/bioengineering-11-00893-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6ac0/11428253/d0da86f33ae9/bioengineering-11-00893-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6ac0/11428253/ff05732659d8/bioengineering-11-00893-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6ac0/11428253/fa2753a14076/bioengineering-11-00893-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6ac0/11428253/c1de6ee37b1c/bioengineering-11-00893-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6ac0/11428253/df01b791ca42/bioengineering-11-00893-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6ac0/11428253/77e5f39cbd40/bioengineering-11-00893-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6ac0/11428253/7fffcbac12d6/bioengineering-11-00893-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6ac0/11428253/3356bdfd5d19/bioengineering-11-00893-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6ac0/11428253/d0da86f33ae9/bioengineering-11-00893-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6ac0/11428253/ff05732659d8/bioengineering-11-00893-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6ac0/11428253/fa2753a14076/bioengineering-11-00893-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6ac0/11428253/c1de6ee37b1c/bioengineering-11-00893-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6ac0/11428253/df01b791ca42/bioengineering-11-00893-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6ac0/11428253/77e5f39cbd40/bioengineering-11-00893-g008.jpg

相似文献

[1]
Anoikis-Related Long Non-Coding RNA Signatures to Predict Prognosis and Immune Infiltration of Gastric Cancer.

Bioengineering (Basel). 2024-9-5

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引用本文的文献

[1]
Machine learning-based model identifies a novel cuproptosis-related mitochondrial gene signature with a key role in the prognosis and treatment of lung adenocarcinoma.

Oncol Lett. 2025-8-21

[2]
Construction and validation of a necroptosis-related lncRNA signature for predicting the prognosis of gastrointestinal cancer patients.

Front Immunol. 2025-8-14

[3]
Cell-in-cell associated lncRNA signature predicts prognosis and immunotherapy response in gastric cancer.

Front Oncol. 2025-7-8

[4]
Anoikis resistance in gastric cancer: a comprehensive review.

Cell Death Dis. 2025-7-15

[5]
Molecular markers for the efficacy of neoadjuvant immunotherapy for head and neck squamous cell carcinoma.

Front Oncol. 2025-6-23

[6]
IL-36-related genes predict prognosis of gastric cancer.

Front Oncol. 2025-6-18

[7]
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Front Oncol. 2025-6-10

[8]
Unexpected outcomes of tislelizumab treatment in thoracic metastasis of malignant phyllodes tumors: a case report and literature review.

Front Oncol. 2025-4-14

[9]
Identification of Anoikis-Related Genes in Gastric Cancer: Bioinformatics and Experimental Validation.

Cancer Med. 2025-4

[10]
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本文引用的文献

[1]
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J Clin Oncol. 2024-9-10

[2]
Development and interpretation of a pathomics-driven ensemble model for predicting the response to immunotherapy in gastric cancer.

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Int J Surg. 2024-8-1

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LncRNA RGMB-AS1 inhibits HMOX1 ubiquitination and NAA10 activation to induce ferroptosis in non-small cell lung cancer.

Cancer Lett. 2024-5-28

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PVT1 promotes proliferation and macrophage immunosuppressive polarization through STAT1 and CX3CL1 regulation in glioblastoma multiforme.

CNS Neurosci Ther. 2024-1

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Multi-omics approach for identifying CNV-associated lncRNA signatures with prognostic value in prostate cancer.

Noncoding RNA Res. 2023-10-10

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JAMA. 2023-12-5

[10]
m6A-related lncRNAs predict prognosis and indicate cell cycle in gastric cancer.

Front Genet. 2023-6-20

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