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希腊阿提卡地区产NDM-1医院分离株的出现。

Emergence of NDM-1-Producing Nosocomial Isolates in Attica Region of Greece.

作者信息

Pappa Olga, Louka Christina, Karadimas Kleon, Maikousi Evangelia, Tzoukmani Angeliki, Polemis Michalis, Panopoulou Anna-Danai, Daniil Ioannis, Chryssou Stella, Mellou Kassiani, Kjeldgaard Jette S, Zarkotou Olympia, Papagiannitsis Costas, Tryfinopoulou Kyriaki

机构信息

AMR and HAIs Laboratory, Central Public Health Laboratory, National Public Health Organization, Vari, 16672 Attica, Greece.

Clinical Microbiology Laboratory, Tzaneion General Hospital of Piraeus, 18536 Attica, Greece.

出版信息

Microorganisms. 2024 Aug 23;12(9):1753. doi: 10.3390/microorganisms12091753.

Abstract

Here, we report on the emergence and spread of multidrug-resistant NDM-1-producing isolates from patients hospitalized in the Attica region, Greece, in 2022 to provide data on their resistome, their virulome, the genetic environment of , and their molecular epidemiology. A total of 17 carbapenem-resistant isolates identified as NDM-producers by immunochromatography at the hospital level were sent to the Central Public Health Laboratory, in the frame of the laboratory surveillance of carbapenem-resistant pathogens, for further characterization. The initial screening for genetic AMR determinants was carried out by PCR and the MDR Direct Flow Chip assay. Typing was performed by MLST and DLST, the latter in a subset of isolates. Further analysis was performed by whole-genome sequencing (WGS) of six isolates from both hospitals to analyze their entire genomes and elucidate their genetic relatedness. All isolates were allocated to international high-risk clones, sixteen to ST773 and one to ST308. Five ST773 and the sole ST308 isolate were found to harbor the gene, along with various other ARGs integrated into their chromosomes, as well as with a wide variety of virulence genes. The gene was located in the integrative and conjugative elements ICE-like and ICE in ST773 and ST308 isolates, respectively. Single-nucleotide polymorphism analysis of the five ST773 isolates indicated their clonal spread in both hospitals. These results suggested that two different molecular events contributed to the emergence of NDM-1-producing isolates in Athenian hospitals, highlighting the need for ongoing surveillance.

摘要

在此,我们报告了2022年在希腊阿提卡地区住院患者中产生多重耐药性NDM-1的分离株的出现和传播情况,以提供有关其耐药组、毒力组、NDM-1基因的遗传环境及其分子流行病学的数据。在医院层面通过免疫色谱法鉴定为NDM产生菌的17株耐碳青霉烯分离株,在耐碳青霉烯病原体实验室监测框架下被送至中央公共卫生实验室进行进一步鉴定。通过PCR和MDR直接流式芯片检测对遗传AMR决定因素进行初步筛选。分型通过MLST和DLST进行,后者在一部分分离株中进行。通过对两家医院的6株分离株进行全基因组测序(WGS)进行进一步分析,以分析其整个基因组并阐明它们的遗传相关性。所有分离株均被归入国际高危克隆,16株为ST773,1株为ST308。发现5株ST773和唯一的ST308分离株携带NDM-1基因,以及整合到其染色体中的各种其他ARGs,以及多种毒力基因。NDM-1基因分别位于ST773和ST308分离株的整合和接合元件ICE样元件和ICE中。对5株ST773分离株的单核苷酸多态性分析表明它们在两家医院中均有克隆传播。这些结果表明,两种不同的分子事件促成了雅典医院中产生NDM-1的分离株的出现,突出了持续监测的必要性。

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