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数据增强在经内镜超声引导细针抽吸术快速现场细胞学评估中对深度学习的有效性。

Effectiveness of data-augmentation on deep learning in evaluating rapid on-site cytopathology at endoscopic ultrasound-guided fine needle aspiration.

机构信息

Department of Gastroenterology and Hepatology, Okayama University Graduate School of Medicine, Dentistry and Pharmaceutical Science, 2-5-1, Shikata-Cho, Kita-Ku, Okayama, Okayama, Japan.

Department of Pathology, Okayama University Graduate School of Medicine, Dentistry and Pharmaceutical Science, Okayama, Japan.

出版信息

Sci Rep. 2024 Sep 28;14(1):22441. doi: 10.1038/s41598-024-72312-3.

DOI:10.1038/s41598-024-72312-3
PMID:39341885
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11439075/
Abstract

Rapid on-site cytopathology evaluation (ROSE) has been considered an effective method to increase the diagnostic ability of endoscopic ultrasound-guided fine needle aspiration (EUS-FNA); however, ROSE is unavailable in most institutes worldwide due to the shortage of cytopathologists. To overcome this situation, we created an artificial intelligence (AI)-based system (the ROSE-AI system), which was trained with the augmented data to evaluate the slide images acquired by EUS-FNA. This study aimed to clarify the effects of such data-augmentation on establishing an effective ROSE-AI system by comparing the efficacy of various data-augmentation techniques. The ROSE-AI system was trained with increased data obtained by the various data-augmentation techniques, including geometric transformation, color space transformation, and kernel filtering. By performing five-fold cross-validation, we compared the efficacy of each data-augmentation technique on the increasing diagnostic abilities of the ROSE-AI system. We collected 4059 divided EUS-FNA slide images from 36 patients with pancreatic cancer and nine patients with non-pancreatic cancer. The diagnostic ability of the ROSE-AI system without data augmentation had a sensitivity, specificity, and accuracy of 87.5%, 79.7%, and 83.7%, respectively. While, some data-augmentation techniques decreased diagnostic ability, the ROSE-AI system trained only with the augmented data using the geometric transformation technique had the highest diagnostic accuracy (88.2%). We successfully developed a prototype ROSE-AI system with high diagnostic ability. Each data-augmentation technique may have various compatibilities with AI-mediated diagnostics, and the geometric transformation was the most effective for the ROSE-AI system.

摘要

快速现场细胞学评估 (ROSE) 已被认为是提高内镜超声引导下细针抽吸 (EUS-FNA) 诊断能力的有效方法;然而,由于细胞病理学家短缺,世界上大多数机构都无法进行 ROSE。为了克服这种情况,我们创建了一个基于人工智能 (AI) 的系统(ROSE-AI 系统),该系统使用扩充数据来评估 EUS-FNA 获得的幻灯片图像。本研究旨在通过比较各种数据增强技术的效果,阐明数据增强对建立有效的 ROSE-AI 系统的影响。ROSE-AI 系统使用通过各种数据增强技术获得的扩充数据进行训练,包括几何变换、颜色空间变换和核滤波。通过进行五重交叉验证,我们比较了每种数据增强技术对提高 ROSE-AI 系统诊断能力的效果。我们从 36 名胰腺癌患者和 9 名非胰腺癌患者中收集了 4059 张分割的 EUS-FNA 幻灯片图像。未经数据增强的 ROSE-AI 系统的诊断能力具有 87.5%、79.7%和 83.7%的敏感性、特异性和准确性。虽然有些数据增强技术降低了诊断能力,但仅使用几何变换技术对增强数据进行训练的 ROSE-AI 系统具有最高的诊断准确性(88.2%)。我们成功开发了一种具有高诊断能力的原型 ROSE-AI 系统。每种数据增强技术可能与 AI 介导的诊断具有不同的兼容性,而几何变换对 ROSE-AI 系统最有效。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a9e/11439075/3757cb0e0f67/41598_2024_72312_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a9e/11439075/6eaf2cc793ca/41598_2024_72312_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a9e/11439075/3fe048ce70b2/41598_2024_72312_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a9e/11439075/0c57cb75201b/41598_2024_72312_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a9e/11439075/3757cb0e0f67/41598_2024_72312_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a9e/11439075/6eaf2cc793ca/41598_2024_72312_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a9e/11439075/3fe048ce70b2/41598_2024_72312_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a9e/11439075/0c57cb75201b/41598_2024_72312_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a9e/11439075/3757cb0e0f67/41598_2024_72312_Fig4_HTML.jpg

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