Department of Microbiology and Biotechnology, Max Rubner-Institut, Federal Research Institute of Nutrition and Food, Hermann-Weigmann-Straße 1, 24103, Kiel, Germany.
Microbial Safety Division, National Institute of Agricultural Sciences, Rural Development Administration, Wanju, 55365, Republic of Korea.
Curr Microbiol. 2024 Sep 28;81(11):382. doi: 10.1007/s00284-024-03911-6.
Ten Gram stain-negative, oxidase-negative, catalase-positive, rod-shaped strains were isolated from lettuce in the city Wanju in South Korea. Comparative 16S rRNA gene analysis and multilocus sequence analysis indicated that the strains grouped closely together with all other Lelliottia (L.)-type strains. The average nucleotide identity (ANI) comparisons of the isolates showed a high relationship between the strains, as the ANI values of all strains ranged from 91.01 to 91.31% when compared to the L. jeotgali-type strain PFL01. All isolates showed the highest genomic DNA sequence similarity to the L. jeotgali PFL01strain at 43.3% when compared with digital DNA-DNA hybridization (dDDH). Strain V104_15of the proposed novel Lelliottia species showed 91.2% and 43.3% similarity with the most closely related L. jeotgali PFL01-type strain in the ANI and dDDH comparisons, respectively. Strain V104_15 could not grow at 45 °C and 7% NaCl, while L. jeotgali PFL01 strain could grow at both these conditions. Strain V104_15 showed ß-glucosidase activity but not α-glucosidase activity, while the L. jeotgali PFL01 strain was α-glucosidase positive but ß-glucosidase negative. The major cellular fatty acids of strain V104_15 were C and cyclo-C including summed features. The mol % G + C content of the genomic DNA of strain V104_15 was 55.74%. Phenotypic and biochemical characteristics, as well as the phylogenomic analysis indicated that the strain V104_15 represents a novel species of the genus Lelliottia, for which the name Lelliottia wanjuensis sp. nov. is proposed. The type strain is V104_15 (= LMG 32996 = DSM 115585).
从韩国万州区的生菜中分离到 10 株革兰氏阴性、氧化酶阴性、触酶阳性、杆状菌株。比较 16S rRNA 基因分析和多位点序列分析表明,这些菌株与所有其他 Lelliottia(L.)型菌株密切聚集在一起。菌株之间的平均核苷酸同一性(ANI)比较显示出高度的相关性,因为所有菌株的 ANI 值在与 L. jeotgali 型菌株 PFL01 比较时,范围在 91.01%至 91.31%之间。所有分离株与 L. jeotgali PFL01 菌株的基因组 DNA 序列相似性最高,与数字 DNA-DNA 杂交(dDDH)相比为 43.3%。与最密切相关的 L. jeotgali PFL01 型菌株相比,新提出的 Lelliottia 种的菌株 V104_15 在 ANI 和 dDDH 比较中分别显示出 91.2%和 43.3%的相似性。菌株 V104_15 不能在 45°C 和 7%NaCl 下生长,而 L. jeotgali PFL01 菌株可以在这两种条件下生长。菌株 V104_15 表现出β-葡萄糖苷酶活性,但没有α-葡萄糖苷酶活性,而 L. jeotgali PFL01 菌株则是α-葡萄糖苷酶阳性但β-葡萄糖苷酶阴性。菌株 V104_15 的主要细胞脂肪酸为 C 和环 C 包括总和特征。菌株 V104_15 基因组 DNA 的 G+C 摩尔百分比为 55.74%。表型和生化特征以及系统发育分析表明,菌株 V104_15 代表 Lelliottia 属的一个新种,建议将其命名为 Lelliottia wanjuensis sp. nov.。模式菌株为 V104_15(= LMG 32996 = DSM 115585)。