Kämpfer Peter, Glaeser Stefanie P, Packroff Gabriele, Behringer Katja, Exner Martin, Chakraborty Trinad, Schmithausen Ricarda M, Doijad Swapnil
1Institut für Angewandte Mikrobiologie, Universität Giessen, Giessen, Germany.
2Wahnbachtalsperrenverband Siegelsknippen, Siegburg, Germany.
Int J Syst Evol Microbiol. 2018 Aug;68(8):2454-2461. doi: 10.1099/ijsem.0.002854. Epub 2018 Jun 22.
Five beige-pigmented, oxidase-negative bacterial isolates, 6331-17, 6332-17, 6333-17, 6334-17 and 9827-07, isolated either from a drinking water storage reservoir or drinking water in 2006 and 2017 in Germany, were examined in detail applying by a polyphasic taxonomic approach. Cells of the isolates were rod-shaped and Gram-stain-negative. Comparison of the 16S rRNA gene sequences of these five isolates showed highest sequence similarities to Lelliottia amnigena (99.98 %) and Lelliottia nimipressuralis (99.99 %). Multilocus sequence analyses based on concatenated partial rpoB, gyrB, infB and atpD sequences confirmed the clustering of these isolates with Lelliottia species, but also revealed a clear distinction to the closest related type strains. Analysis of the genome sequences of these isolates indicated >70 % in silico DNA-DNA hybridization and high average nucleotide identities between strains. Nevertheless, they showed only <70 and <95 % similarity to the type strains of these two Lelliottia species. The fatty acid profiles of these isolates were very similar and consisted of the major fatty acids C16:0, C17 : 0cyclo, C15 : 0iso 2-OH/C16 : 1ω7c and C18 : 1ω7c. In addition, physiological/biochemical tests revealed high phenotypic similarity to each other. These cumulative data indicate that these isolates represent a novel Lelliottia species, for which the name Lelliottia aquatilis sp. nov. is proposed, with strain 6331-17 (=CCM 8846=CIP 111609=LMG 30560) as the type strain.
2006年和2017年在德国从饮用水储存水库或饮用水中分离出的5株米色色素沉着、氧化酶阴性的细菌菌株,6331-17、6332-17、6333-17、6334-17和9827-07,采用多相分类方法进行了详细研究。分离菌株的细胞呈杆状,革兰氏染色阴性。这5株分离株的16S rRNA基因序列比较显示,与水生勒氏菌(99.98%)和压力勒氏菌(99.99%)的序列相似性最高。基于串联的部分rpoB、gyrB、infB和atpD序列的多位点序列分析证实了这些分离株与勒氏菌属物种聚类,但也显示出与最密切相关的模式菌株有明显区别。对这些分离株的基因组序列分析表明,菌株间的电子DNA-DNA杂交率>70%,平均核苷酸同一性高。然而,它们与这两种勒氏菌属物种的模式菌株的相似性仅分别<70%和<95%。这些分离株的脂肪酸谱非常相似,主要脂肪酸包括C16:0、C17:0环丙烷、C15:0异2-OH/C16:1ω7c和C18:1ω7c。此外,生理/生化测试显示它们彼此之间具有高度的表型相似性。这些累积数据表明,这些分离株代表一个新的勒氏菌属物种,为此提出新名称水生勒氏菌(Lelliottia aquatilis sp. nov.),模式菌株为6331-17(=CCM 8846=CIP 111609=LMG 30560)。