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水生勒氏菌新种,从饮用水中分离得到。

Lelliottia aquatilis sp. nov., isolated from drinking water.

作者信息

Kämpfer Peter, Glaeser Stefanie P, Packroff Gabriele, Behringer Katja, Exner Martin, Chakraborty Trinad, Schmithausen Ricarda M, Doijad Swapnil

机构信息

1​Institut für Angewandte Mikrobiologie, Universität Giessen, Giessen, Germany.

2​Wahnbachtalsperrenverband Siegelsknippen, Siegburg, Germany.

出版信息

Int J Syst Evol Microbiol. 2018 Aug;68(8):2454-2461. doi: 10.1099/ijsem.0.002854. Epub 2018 Jun 22.

Abstract

Five beige-pigmented, oxidase-negative bacterial isolates, 6331-17, 6332-17, 6333-17, 6334-17 and 9827-07, isolated either from a drinking water storage reservoir or drinking water in 2006 and 2017 in Germany, were examined in detail applying by a polyphasic taxonomic approach. Cells of the isolates were rod-shaped and Gram-stain-negative. Comparison of the 16S rRNA gene sequences of these five isolates showed highest sequence similarities to Lelliottia amnigena (99.98 %) and Lelliottia nimipressuralis (99.99 %). Multilocus sequence analyses based on concatenated partial rpoB, gyrB, infB and atpD sequences confirmed the clustering of these isolates with Lelliottia species, but also revealed a clear distinction to the closest related type strains. Analysis of the genome sequences of these isolates indicated >70 % in silico DNA-DNA hybridization and high average nucleotide identities between strains. Nevertheless, they showed only <70 and <95 % similarity to the type strains of these two Lelliottia species. The fatty acid profiles of these isolates were very similar and consisted of the major fatty acids C16:0, C17 : 0cyclo, C15 : 0iso 2-OH/C16 : 1ω7c and C18 : 1ω7c. In addition, physiological/biochemical tests revealed high phenotypic similarity to each other. These cumulative data indicate that these isolates represent a novel Lelliottia species, for which the name Lelliottia aquatilis sp. nov. is proposed, with strain 6331-17 (=CCM 8846=CIP 111609=LMG 30560) as the type strain.

摘要

2006年和2017年在德国从饮用水储存水库或饮用水中分离出的5株米色色素沉着、氧化酶阴性的细菌菌株,6331-17、6332-17、6333-17、6334-17和9827-07,采用多相分类方法进行了详细研究。分离菌株的细胞呈杆状,革兰氏染色阴性。这5株分离株的16S rRNA基因序列比较显示,与水生勒氏菌(99.98%)和压力勒氏菌(99.99%)的序列相似性最高。基于串联的部分rpoB、gyrB、infB和atpD序列的多位点序列分析证实了这些分离株与勒氏菌属物种聚类,但也显示出与最密切相关的模式菌株有明显区别。对这些分离株的基因组序列分析表明,菌株间的电子DNA-DNA杂交率>70%,平均核苷酸同一性高。然而,它们与这两种勒氏菌属物种的模式菌株的相似性仅分别<70%和<95%。这些分离株的脂肪酸谱非常相似,主要脂肪酸包括C16:0、C17:0环丙烷、C15:0异2-OH/C16:1ω7c和C18:1ω7c。此外,生理/生化测试显示它们彼此之间具有高度的表型相似性。这些累积数据表明,这些分离株代表一个新的勒氏菌属物种,为此提出新名称水生勒氏菌(Lelliottia aquatilis sp. nov.),模式菌株为6331-17(=CCM 8846=CIP 111609=LMG 30560)。

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