Dogsa Iztok, Bellich Barbara, Blaznik Mojca, Lagatolla Cristina, Ravenscroft Neil, Rizzo Roberto, Stopar David, Cescutti Paola
University of Ljubljana, Biotechnical Faculty, Department of Microbiology, Ljubljana, Slovenia.
Department of Advanced Translational Diagnostics, Institute for Maternal and Child Health, IRCCS "Burlo Garofolo", Trieste, Italy.
NPJ Biofilms Microbiomes. 2024 Oct 2;10(1):98. doi: 10.1038/s41522-024-00555-z.
Extracellular polysaccharides are crucial components for biofilm development. Although Bacillus subtilis is one of the most characterized Gram-positive biofilm model system, the structure-function of its exopolysaccharide, EpsA-O, remains to be elucidated. By combining chemical analysis, NMR spectroscopy, rheology, and molecular modeling, high-resolution data of EpsA-O structure from atom to supramolecular scale was obtained. The repeating unit is composed of the trisaccharide backbone [→3)-β-D-QuipNAc4NAc-(1→3)-β-D-GalpNAc-(1→3)-α-D-GlcpNAc-(1], and the side chain β-D-Galp(3,4-S-Pyr)-(1→6)-β-D-Galp(3,4-S-Pyr)-(1→6)-α-D-Galp-(1→ linked to C4 of GalNAc. Close agreement between the primary structure and rheological behavior allowed us to model EpsA-O macromolecular and supramolecular solution structure, which can span the intercellular space forming a gel that leads to a complex 3D biofilm network as corroborated by a mutant strain with impaired ability to produce EpsA-O. This is a comprehensive structure-function investigation of the essential biofilm adhesive exopolysaccharide that will serve as a useful guide for future studies in biofilm architecture formation.
胞外多糖是生物膜形成的关键成分。尽管枯草芽孢杆菌是最具特征的革兰氏阳性生物膜模型系统之一,但其胞外多糖EpsA-O的结构与功能仍有待阐明。通过结合化学分析、核磁共振光谱、流变学和分子建模,获得了从原子尺度到超分子尺度的EpsA-O结构的高分辨率数据。重复单元由三糖主链[→3)-β-D-4-乙酰氨基-4-脱氧喹诺酮酸-(1→3)-β-D-氨基半乳糖-(1→3)-α-D-氨基葡萄糖-(1]组成,侧链β-D-半乳糖(3,4-磺酸基吡啶)-(1→6)-β-D-半乳糖(3,4-磺酸基吡啶)-(1→6)-α-D-半乳糖-(1→连接到氨基半乳糖的C4位。一级结构与流变行为之间的密切一致性使我们能够对EpsA-O的大分子和超分子溶液结构进行建模,该结构可以跨越细胞间空间形成凝胶,进而形成复杂的三维生物膜网络,这一点在产生EpsA-O能力受损的突变菌株中得到了证实。这是对生物膜必需的粘附性胞外多糖进行的全面结构-功能研究,将为未来生物膜结构形成的研究提供有用的指导。